GTEx Histological Images
Displaying 25 of 1475 results.
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| Case ID | Age | Gender | Specimen ID | Tissue Type | Fixative | Autolysis | Pathology Review Comments | Acceptability | Action |
| GTEX-QVJO | 61-70 | Female | GTEX-QVJO-0426 | Lung | PAXgene | 3 | 2 9x7.5mm aliquots. Diffuse infiltrative process, suspect squamous carcinoma/fibrosis. Severe autolysis hampers evaluation; need slides to review | Unacceptable |  |
| GTEX-QVJO | 61-70 | Female | GTEX-QVJO-0626 | Esophagus - muscularis | PAXgene | 1 | 6 6.5x3mm pieces. Foci of squamous mucosa, more than above? Switched aliquots? | Unacceptable | |
| GTEX-QVJO | 61-70 | Female | GTEX-QVJO-0726 | Esophagus - mucosa | PAXgene | 1 | 6 ~6x3mm pieces. Rare minute foci of squamous mucosa | Unacceptable | |
| GTEX-QVJO | 61-70 | Female | GTEX-QVJO-1126 | Adrenal glands | PAXgene | 2 | 2 ~9x8mm aliquots; one is ~85% fat; cannot be used; unable to monitor corresponding aliquot | Unacceptable | |
| GTEX-QVJO | 61-70 | Female | GTEX-QVJO-1526 | Thyroid gland | PAXgene | 2 | 2 ~8x7mm aliquots. Suspect malignancy, ?follicular variant of papillary carcinoma, pending glass review. Autolysis hampers analysis | Unacceptable | |
| GTEX-QVJO | 61-70 | Female | GTEX-QVJO-2026 | Coronary artery | PAXgene | 1 | 2 ~3x0.5mm aliquots, each with 0.5-1mm layer of fat, to much adherent fat | Unacceptable | |
| GTEX-QVUS | 61-70 | Female | GTEX-QVUS-1026 | Kidney - medulla | PAXgene | 3 | 2 ~ 7.5x7mm aliquots, both with glomeruli, must be re-classified as renal cortex, also large fragment (10x2mm) of artery in one aliquot with Mockeberg’s sclerosis | Unacceptable | |
| GTEX-QVUS | 61-70 | Female | GTEX-QVUS-1226 | Coronary artery | PAXgene | 1 | 2 ~2.5mm d aliquots, both with 40-50% adherent fat peripherally, layer of up to 1.5-2mm. 60-70% occlusive atherosclerotic deposits, focally calcified | Unacceptable | |
| GTEX-QVUS | 61-70 | Female | GTEX-QVUS-1826 | Nerve - tibial | PAXgene | 1 | 2 ~ 6x2.5mm aliquots. 50% or more of both is contaminating peripheral adherent fat | Unacceptable | |
| GTEX-QXCU | 51-60 | Male | GTEX-QXCU-1626 | Pancreas | PAXgene | 1 | 2 ~8x8mm aliquots; one is >80% fat; cannot use as there is no way of knowing which is which in LDACC samples | Unacceptable | |
| GTEX-R3RS | 41-50 | Female | GTEX-R3RS-1726 | Kidney - cortex | PAXgene | 2 | 6 pieces measuring up to 7.5x3.6 mm; all show extensive destruction of renal parenchyma with fibrosis, calcification and ‘thyroidization’ characteristic of chronic pyelonephritis; arteries greatly thickened; no viable glomeruli; | Unacceptable | |
| GTEX-R3RS | 41-50 | Female | GTEX-R3RS-1826 | Kidney - medulla | PAXgene | 2 | 2 pieces 14x9 & 9x7 mm; virtually all adipose tissue | Unacceptable | |
| GTEX-R45C | 61-70 | Female | GTEX-R45C-1626 | Pancreas | PAXgene | 2 | 2 pieces 10x8&9x9 mm; 100% adipose tissue with focal lymphoid aggregates; no pancreas present | Unacceptable | |
| GTEX-R45C | 61-70 | Female | GTEX-R45C-1726 | Adrenal glands | PAXgene | 3 | 2 pieces 11x9 & 10x4 mm; >90% adipose, only a thin rim of adrenal (autolyzed) present | Unacceptable | |
| GTEX-R55E | 21-40 | Male | GTEX-R55E-0626 | Mammary tissue (breast) | PAXgene | 1 | 2 pieces, 8x7 & 9x6 mm; all adipose, no mammary tissue | Unacceptable | |
| GTEX-R55G | 41-50 | Female | GTEX-R55G-1726 | Vagina | PAXgene | 1 | 6 pieces, ~8x3mm Only 3 show squamous mucosa and submucosa; 3 are smooth muscle, unknown provenance. | Unacceptable | |
| GTEX-RM2N | 51-60 | Male | GTEX-RM2N-1526 | Nerve - tibial | PAXgene | 0 | 2 pieces of tendon, incorrect tissue | Unacceptable | |
| GTEX-RN5K | 51-60 | Female | GTEX-RN5K-2026 | Esophagus - mucosa | PAXgene | 2 | 6 pieces ~6x1mm, minimal squamous mucosa | Unacceptable | |
| GTEX-RN5K | 51-60 | Female | GTEX-RN5K-2526 | Kidney - medulla | PAXgene | 3 | 3 aliquosts, one all cortex, one is medulla, cannot be retained as either | Unacceptable | |
| GTEX-RN5K | 51-60 | Female | GTEX-RN5K-2926 | Coronary artery | PAXgene | 1 | 2 aliquots, 1 3.5mm d, one is fat and minute vessel, unacceptable for use | Unacceptable | |
| GTEX-RNOR | 51-60 | Female | GTEX-RNOR-1526 | Pancreas | PAXgene | 1 | 2 pieces, 9x8 & 7x7 mm; both pieces are all adipose; no pancreas | Unacceptable | |
| GTEX-RVPU | 51-60 | Male | GTEX-RVPU-1326 | Kidney - medulla | PAXgene | 2 | 2 aliquots, one all fat/fibrovascular tissue, one vessel + small focus completely autozlyzed renal tubules | Unacceptable | |
| GTEX-RVPU | 51-60 | Male | GTEX-RVPU-2026 | Esophagus - mucosa | PAXgene | 1 | 6 pieces, singlue minute fragment of squamou mucosa; rest is fibrous tissue | Unacceptable | |
| GTEX-RWSA | 41-50 | Male | GTEX-RWSA-0326 | Coronary artery | PAXgene | 1 | 2 aliquots, ~3.2mm. One is all fat, the other is ~90% fat with ~0.8mm vessel on edge of one aliquot | Unacceptable | |
| GTEX-S33H | 21-40 | Male | GTEX-S33H-0226 | Thyroid gland | PAXgene | 1 | 2 pieces 6x6 & 6x5 mm; NO THYROID; only skeletal muscle | Unacceptable | |