GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0726 |
Thyroid gland
|
PAXgene |
1
|
2 ~9.5x5.5mm aliquots. Adenomatoid nodules with regressive changes
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0826 |
Lung
|
PAXgene |
2
|
2 ~9x8mm aliquots, diffuse emphysematous changes, patchy chronic peribronchial inflammation
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0926 |
Heart
|
PAXgene |
1
|
2 9x8mm aliquots, patchy interstitial fibrosis
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1026 |
Coronary artery
|
PAXgene |
1
|
2 ~3.5x2.5mm aliquots, one with partial ~0.5mm rim of fat. Minimal/no atherosclerotic deposition
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1126 |
Aorta
|
PAXgene |
1
|
6 ~9x1.5mm pieces. Minimal atherosis
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1226 |
Liver
|
PAXgene |
1
|
2 ~7.5x7.5mm aliquots, diffuse macrovesicular steatosis and chronic hepatitis with bridging fibrosis
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1326 |
Pancreas
|
PAXgene |
1
|
2 ~7x6.5mm aliquots, remarkably well preserved no saponification. One aliquot with 5x0.5mm adherent fat; otherwise clean specimens
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 ~6x1mm pieces; squamous mucosa is 15-40% of thickness
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 ~7x4mm pieces
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1626 |
Spleen
|
PAXgene |
2
|
2 ~ 7.5x7.0mm aliquots; red pulp especially poorly preserved
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1726 |
Stomach
|
PAXgene |
3
|
6 ~9x1.5mm pieces. Mucosa poorly preserved over-all, superficial portions sloughed and badly autolyzed-- ~20-30% of thickness
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1826 |
Urinary bladder
|
PAXgene |
2
|
6 ~8.5x4mm pieces. Urothelium is <1% of thickness, partly sloughed; some areas of cystitis cystica/ reactive changes
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1926 |
Colon, transverse
|
PAXgene |
2
|
6 ~ 9x3/5mm pieces. Mucosa generally well-preserved, some autolysis superficially, is ~10% of thickness
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-2026 |
Prostate
|
PAXgene |
1
|
2 ~9x6.5mm aliquots, patchy glandular hyperplasia and atrophy
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-2126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 ~9.5x6.5mm aliquots. Ductal elements visible in both
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0126 |
Spleen
|
PAXgene |
1
|
2 pieces ~10x8mm; slight congestion
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0226 |
Pancreas
|
PAXgene |
1
|
2 pieces, ~9x7 & 8x8 mm; focal atrophic lobule; <10% adipose; islets ~150um appear normal
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0326 |
Coronary artery
|
PAXgene |
1
|
2 pieces, ~2.5 mm arteries with focal eccentric plaques; ~20% peripheral adipose tissue
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0426 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 11x3 mm; no plaques; 2 pieces have about 40% periaortic adipose tissue
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0526 |
Heart
|
PAXgene |
1
|
2 pieces, 11x7 & 9x8.7; few contraction bands
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0626 |
Lung
|
PAXgene |
0
|
2 pieces ~8x6 mm; good morphology, no inflammation
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 8.5x4.9 mm; good muscle layer
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 5.9x3.8 mm; good squamous mucosa
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0926 |
Urinary bladder
|
PAXgene |
3
|
6 thin pieces up to 5.7x1.2 mm; epithelium largely sloughed; thin aliquot with no muscle; cassette ridge markings suggest tight fit
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-1126 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 8.7x2.6 mm; mucosa almost completely autolyzed; muscle moderately autolyzed
|
Acceptable
|
|