GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-0626 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, each with 1 1mm artery and 1.5mm vein; 20% adipose tissue
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-0726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces up to 10x6 mm; ducts; ~30% adipose
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-0826 |
Thyroid gland
|
PAXgene |
2
|
2 pieces ~7x7 & 7x4mm; vascular congestion
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-0926 |
Heart
|
PAXgene |
1
|
2 pieces ~7.8x6 mm;
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1026 |
Coronary artery
|
PAXgene |
1
|
2 pieces each with 2 mm artery; small plaque
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1126 |
Lung
|
PAXgene |
1
|
2 pieces up to 9.6x7 mm; focal hemorrhages, anthracotic pigment focally
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1226 |
Aorta
|
PAXgene |
1
|
6 pieces up to 9.6x1.7 mm
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1326 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 7x3 mm; all are muscularis propria; re-label as Esophagus - muscularis
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 8.6x3 mm; all have mucosa not muscularis propria; re-label as Esophagus- mucosa; surface desquamation and separation of epithelium from lamina propria; possible chemical exposure
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1526 |
Liver
|
PAXgene |
1
|
2 pieces, 9x8 & 10x6mm; severe vascular congestion mainly centrolobular
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1626 |
Spleen
|
PAXgene |
1
|
2 pieces 8x7 & 7x5 mm; heavily congested
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1726 |
Pancreas
|
PAXgene |
2
|
2 pieces 9x7 & 8x6 mm;
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces 18x9 & 14x6 mm
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1926 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces up to 7.7x3.5 mm; hyperemia and red cell casts
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-2026 |
Kidney - medulla
|
PAXgene |
2
|
2 pieces up to 9x8 mm; one piece has 40% cortex other has 10% cortex; hyperemia and red cell casts;
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-2126 |
Stomach
|
PAXgene |
3
|
6 pieces up to 9.6x3.7 mm; severe mucosal hyperemia and superficial hemorrhages
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 12x3.5 mm; mucosa very autolyzed, muscle slightly autolyzed(1); lymphoid cells preserved; submucosa very edematous
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-2326 |
Urinary bladder
|
PAXgene |
3
|
6 pieces up to 8.6x5; mucosa on all, but sloughed (3); muscle preserved (1)
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-2426 |
Prostate
|
PAXgene |
3
|
2 pieces 9x8 & 8x7 mm; glands autolyzed (3), stroma preserved (1)
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0126 |
Testis
|
PAXgene |
2
|
2 ~8.5x6mm aliquots. Spermatogenesis diffusely reduced/arrested
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0226 |
Skin, leg
|
PAXgene |
1
|
6 ~8x3mm pieces. Squamous epithelium is ~1-2% of thickness. ~1mm layer of subcutaneous fat present in 5 pieces
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0326 |
Adipose tissue
|
PAXgene |
1
|
2 ~9x9mm aliquots
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 ~6x5mm aliquots, ~10% interstitial/peripheral adipose tissue
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0526 |
Artery - tibial
|
PAXgene |
1
|
2 ~3mm d aliquots, clean specimens
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0626 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~11x6mm aliquot; <5% interstitial adipose tissue, clean specimens
|
Acceptable
|
|