GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2026 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, no cortex, renal hilar elements including tubules, urothelium, vascular elements, hilar fat (~40%)
|
Unacceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2126 |
Mammary tissue (breast)
|
PAXgene |
2
|
1 piece (fragments), gynecomastoid stromal and ductal (rep delineated) hyperplasia-ductal elements poorly preserved
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2226 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa up to ~1.3mm, ~40-50% thickness, moderately advanced autolysis
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2326 |
Prostate
|
PAXgene |
2
|
2 pieces, glandular elements with advanced autolysis
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2426 |
Testis
|
PAXgene |
2
|
2 pieces, autolysis precludes assessment of spermatogenesis
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2526 |
Ileum
|
PAXgene |
3
|
6 pieces, No target lymphoid aggregates, ~70% muscularis/adipose tissue
|
Unacceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.2mm, advanced autolysis, glandular elements sloughed
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2726 |
Colon, sigmoid
|
PAXgene |
1
|
5 pieces, ~40% target muscularis, rest is fat/fibrous tissue
|
Unacceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2826 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, ~90% glandular elements, delineated
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2926 |
Pituitary gland
|
PAXgene |
2
|
1 piece, mainly adenohypophysis, 4x1mm nubbin of neurohypophysis, delineated
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-3026 |
Brain - cortex
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-3126 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1HFI7
|
51-60
|
Female
|
GTEX-1HFI7-0126 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; 50% fat/50% fibrocollagenous stroma with ducts/lobules
|
Acceptable
|
 |
GTEX-1HFI7
|
51-60
|
Female
|
GTEX-1HFI7-0226 |
Spleen
|
PAXgene |
0
|
2 pieces; mild congestion
|
Acceptable
|
 |
GTEX-1HFI7
|
51-60
|
Female
|
GTEX-1HFI7-0326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; mild fibrosis, ~10 and 40% fat/fibrous tissue
|
Acceptable
|
 |
GTEX-1HFI7
|
51-60
|
Female
|
GTEX-1HFI7-0426 |
Aorta
|
PAXgene |
1
|
6 pieces; atherosclerosis
|
Acceptable
|
 |
GTEX-1HFI7
|
51-60
|
Female
|
GTEX-1HFI7-0526 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 1 is 30% fibrous, 2nd is 30% fibrous/fat
|
Acceptable
|
 |
GTEX-1HFI7
|
51-60
|
Female
|
GTEX-1HFI7-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces; both include significant residual fat, up to 2.3 mm (60 and 80%)
|
Acceptable
|
 |
GTEX-1HFI7
|
51-60
|
Female
|
GTEX-1HFI7-0726 |
Omentum
|
PAXgene |
0
|
2 pieces; mature fat
|
Acceptable
|
 |
GTEX-1HFI7
|
51-60
|
Female
|
GTEX-1HFI7-0826 |
Heart
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
 |
GTEX-1HFI7
|
51-60
|
Female
|
GTEX-1HFI7-0926 |
Ovary
|
PAXgene |
0
|
2 pieces; ovary with inclusion glands with adjacent calcification
|
Acceptable
|
 |
GTEX-1HFI7
|
51-60
|
Female
|
GTEX-1HFI7-1026 |
Gastroesophageal junction
|
PAXgene |
0
|
6 pieces; target muscularis
|
Acceptable
|
 |
GTEX-1HFI7
|
51-60
|
Female
|
GTEX-1HFI7-1126 |
Vagina
|
PAXgene |
1
|
6 pieces
|
Acceptable
|
 |
GTEX-1HFI7
|
51-60
|
Female
|
GTEX-1HFI7-1226 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; esophagitis with rare focus of invasive fungal elements
|
Acceptable
|
 |
GTEX-1HFI7
|
51-60
|
Female
|
GTEX-1HFI7-1326 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; target muscularis
|
Acceptable
|
 |