GTEX-12WSE
|
21-40
|
Male
|
GTEX-12WSE-2526 |
Prostate
|
PAXgene |
3
|
2 pieces; glands completely autolyzed; stroma intact; collection of ganglion cells annotated
|
Acceptable
|
|
GTEX-12WSE
|
21-40
|
Male
|
GTEX-12WSE-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa largely autolyzed; inner muscle moderately autolyzed
|
Acceptable
|
|
GTEX-12WSE
|
21-40
|
Male
|
GTEX-12WSE-2726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; large amount of fat on both sides (adventitia and submucosa) measuring up to 2.5 mm and thicker than the muscularis
|
Acceptable
|
|
GTEX-12WSE
|
21-40
|
Male
|
GTEX-12WSE-2826 |
Ileum
|
PAXgene |
3
|
4 pieces; too autolyzed and with minimal lymphoid tissue
|
Unacceptable
|
|
GTEX-12WSE
|
21-40
|
Male
|
GTEX-12WSE-2926 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces; foci of adherent meninges annotated
|
Acceptable
|
|
GTEX-12WSE
|
21-40
|
Male
|
GTEX-12WSE-3026 |
Brain - cortex
|
PAXgene |
1
|
4 pieces
|
Acceptable
|
|
GTEX-12WSE
|
21-40
|
Male
|
GTEX-12WSE-3126 |
Pituitary gland
|
PAXgene |
2
|
1 piece; anterior
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, minimal dermal fat, squamous epithelium is ~40-60 microns
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~10-15% fibro-fascial tisssue, rep. delineated
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-0326 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, fibroadipose tissue only, no ductal elements noted
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, rim of adherent fat up to ~1mm discontinuous around both setions
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-0526 |
Artery - tibial
|
PAXgene |
0
|
1 piece, lumen subtotally occluded with focally calcified atheromatous deposits
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-0626 |
Thyroid gland
|
PAXgene |
0
|
2 pieces, abnormal, infiltrating neoplasm, oncocytic features, effaaces entire specimen
|
Unacceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-0726 |
Lung
|
PAXgene |
1
|
2 pieces, mild congestion
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-0826 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, ~30% fat, rep foci delineated
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-0926 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, <5% interstitial fat
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-1026 |
Coronary artery
|
PAXgene |
1
|
2 pieces, small nubbin of fat on one section; atherosclerotic luminal deposits both sections, delineated, one totally occclusive
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-1126 |
Heart
|
PAXgene |
1
|
2 pieces, chronic/subacute ischemic changes, microinfract encircled
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-1226 |
Aorta
|
PAXgene |
1
|
6 pieces, atherosclerotic deposits up to ~0.5mm, adherent fat/serosa up to ~1mm, several sections, rep delineated
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-1326 |
Liver
|
PAXgene |
1
|
2 pieces, mild congestion, minimal fat
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-1426 |
Spleen
|
PAXgene |
1
|
2 pieces, no significant abnormalities
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-1526 |
Omentum
|
PAXgene |
1
|
2 pieces, mld mesothelial hyperplasia/fibrosis, rep focus delineated
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-1626 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, trace dermal fat; squamous epithelium is ~60microns. One section mis-embedded (squamous epithelium not visible)
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~20-30% thickness
|
Acceptable
|
|
GTEX-12WSF
|
61-70
|
Male
|
GTEX-12WSF-1826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, all muscularis, good specimens
|
Acceptable
|
|