GTEX-18QFQ
|
21-40
|
Male
|
GTEX-18QFQ-1626 |
Ileum
|
PAXgene |
2
|
6 pieces; good lymphoid component, single non-caseating granuloma (marked)
|
Acceptable
|
|
GTEX-18QFQ
|
21-40
|
Male
|
GTEX-18QFQ-1726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; predominantly muscularis, 2 include substantial fat, 1 includes small portion of mucosa
|
Acceptable
|
|
GTEX-18QFQ
|
21-40
|
Male
|
GTEX-18QFQ-1826 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed
|
Acceptable
|
|
GTEX-18QFQ
|
21-40
|
Male
|
GTEX-18QFQ-1926 |
Testis
|
PAXgene |
2
|
2 pieces; spermatogenesis is present
|
Acceptable
|
|
GTEX-18QFQ
|
21-40
|
Male
|
GTEX-18QFQ-2026 |
Prostate
|
PAXgene |
1
|
2 pieces; admixed stroma and glands
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-0126 |
Spleen
|
PAXgene |
0
|
2 pieces
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-0226 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; both include 50-60% attached fat/connective tissue with some inflammatory cells
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-0326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; one piece includes ~10% fat/fibrous/vascular tissue, second includes ~30% fat/vascular/skeletal muscle (contaminating elements marked)
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-0426 |
Aorta
|
PAXgene |
1
|
6 pieces
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-0526 |
Lung
|
PAXgene |
0
|
2 pieces; includes pleura, atelectasis with patchy widened airspaces, bronchopneumonia, pulmonary macrophages, portion of bronchus/cartilage
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-0626 |
Omentum
|
PAXgene |
0
|
2 pieces; mature fat
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-0726 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis is present
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-0826 |
Prostate
|
PAXgene |
1
|
2 pieces; includes small portion of seminal vesicle
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-0926 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa with insufficient lymphoid tissue to warrant analysis
|
Unacceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-1026 |
Colon, sigmoid
|
PAXgene |
0
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-1126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness sections, few with minimal attached fat
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-1226 |
Stomach
|
PAXgene |
1
|
6 pieces; full thickness sections
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-1326 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-1426 |
Gastroesophageal junction
|
PAXgene |
0
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-1526 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-1626 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; predominantly fat, 1 piece has small portion fibrocollagenous stroma (<10%)
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-1726 |
Minor salivary glands
|
PAXgene |
0
|
2 pieces; salivary gland elements with mild chronic inflammation, 1 piece is ~80% salivary gland with 20% stroma/skeletal muscle, 2nd is only ~10% gland with stroma, lip, skeletal muscle
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-1826 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; well trimmed
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-1926 |
Skin, leg
|
PAXgene |
1
|
6 pieces; predominantly well trimmed with up to 5-10% internal/external fat. epidermis measures 53 micorns
|
Acceptable
|
|
GTEX-1A3MV
|
21-40
|
Male
|
GTEX-1A3MV-2026 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; skeletal muscle with ~ 5 and 20% internal/external fat
|
Acceptable
|
|