GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-2326 |
Fallopian tube
|
PAXgene |
1
|
Not fallopian tube, small artery
|
Unacceptable
|
|
GTEX-PLZ4
|
51-60
|
Female
|
GTEX-PLZ4-0826 |
Coronary artery
|
PAXgene |
1
|
2 ~3x2mm pieces, fat and myocardium; 1 minute vessel less than 10% of one aliquot
|
Unacceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1426 |
Prostate
|
PAXgene |
1
|
Not prostate, seminal vesicle
|
Unacceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1926 |
Artery - tibial
|
PAXgene |
1
|
Not artery. One piece of peripheral nerve; one piece fat with minute vein (0.2x0.6mm
|
Unacceptable
|
|
GTEX-POMQ
|
21-40
|
Female
|
GTEX-POMQ-1026 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 11x4&13x6mm; fibroadipose and skeletal muscle NO THYROID
|
Unacceptable
|
|
GTEX-POMQ
|
21-40
|
Female
|
GTEX-POMQ-1126 |
Pancreas
|
PAXgene |
1
|
2 pieces of poorly fixed adipose tissue ~12x9 & 15x8mm; NO PANCREAS
|
Unacceptable
|
|
GTEX-POMQ
|
21-40
|
Female
|
GTEX-POMQ-1626 |
Cervix - endocervix
|
PAXgene |
1
|
4 pieces, ~6x7mm, 3 ectocervix focally atrophic surface, 1 piece endocervix
|
Unacceptable
|
|
GTEX-POYW
|
61-70
|
Male
|
GTEX-POYW-2226 |
Urinary bladder
|
PAXgene |
1
|
6 pieces of adipose tissue only; no urothelium or detrussor muscle is present
|
Unacceptable
|
|
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces,~3.3x1.6mm vein w/30% fat; other piece is only fat
|
Unacceptable
|
|
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-0826 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, ~7x7mm;8x5mm; no mammary tissue, all fat and foci of fibrous stroma
|
Unacceptable
|
|
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-2326 |
Prostate
|
PAXgene |
1
|
2 pieces,~11x7 mm; fibromuscular stroma, few glands (probably seminal vesicle) ; other piece resembles bladder wall; tissue tears
|
Unacceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-1326 |
Thyroid gland
|
PAXgene |
1
|
Incorrect tissue, under-fixed adipose tissue only
|
Unacceptable
|
|
GTEX-PWCY
|
21-40
|
Female
|
GTEX-PWCY-1526 |
Cervix - endocervix
|
PAXgene |
1
|
4 pieces, 2 are endocervix;2 are endometrium
|
Unacceptable
|
|
GTEX-PWCY
|
21-40
|
Female
|
GTEX-PWCY-1626 |
Cervix - ectocervix
|
PAXgene |
1
|
4 pieces, labeled endocervix; 2 are ectocervix, 2 are endocervix
|
Unacceptable
|
|
GTEX-PWN1
|
41-50
|
Female
|
GTEX-PWN1-1326 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, ~8x7mm. No adrenal; all fat;
|
Unacceptable
|
|
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1126 |
Fallopian tube
|
PAXgene |
1
|
2 pieces fibrovascular tissue, no tube is present
|
Unacceptable
|
|
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces of fibroadipose tissue, unknown provenance.
|
Unacceptable
|
|
GTEX-Q2AG
|
41-50
|
Female
|
GTEX-Q2AG-1826 |
Kidney - medulla
|
PAXgene |
3
|
2 ~6.5x6mm pieces, both with numerous glomeruli (50% or more of both aliquots)
|
Unacceptable
|
|
GTEX-Q734
|
41-50
|
Female
|
GTEX-Q734-1326 |
Fallopian tube
|
PAXgene |
0
|
2 pieces fibro-vascular tissue, not tube
|
Unacceptable
|
|
GTEX-Q734
|
41-50
|
Female
|
GTEX-Q734-2126 |
Nerve - tibial
|
PAXgene |
1
|
4 ~4.5x3mm pieces of tendon. Incorrect tissue, not in GTEx list
|
Unacceptable
|
|
GTEX-QDT8
|
21-40
|
Female
|
GTEX-QDT8-0726 |
Coronary artery
|
PAXgene |
1
|
2 aliquots ~3 x 1.5mm. Only one has a ~0.66mm coronary artery section; the rest is adipose tissue; artery is less than 10% of total tissue area
|
Unacceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-1326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces of adipose tissue without mammary elements; large central defects in 15x12 & 12x12 mm aliquots; probably poorly fixed
|
Unacceptable
|
|
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-1826 |
Artery - tibial
|
PAXgene |
1
|
2 3x1mm aliquots, surrounded in to or part by up to 2mm rim of fat, small vessels & connective tissue
|
Unacceptable
|
|
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-2026 |
Coronary artery
|
PAXgene |
1
|
2 ~2mm artery. Dense calcification. Note: aliquots surrounded by up to2.5-5mm layer of fat (60% of total aliquot)
|
Unacceptable
|
|
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-2726 |
Kidney - medulla
|
PAXgene |
2
|
2 ~9x8mm aliquots. One medulla, one cortex, tubules badly autolyzed
|
Unacceptable
|
|