GTEX-1HCU8
|
61-70
|
Female
|
GTEX-1HCU8-2426 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis, incidental ~1mm submucosal mucus gland delineated
|
Acceptable
|
 |
GTEX-1HCU8
|
61-70
|
Female
|
GTEX-1HCU8-2526 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, squamous epithelium is ~70 microns; adherent dermal fat up to ~1mm, rep. delineated.
|
Acceptable
|
 |
GTEX-1HCU8
|
61-70
|
Female
|
GTEX-1HCU8-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.4mm, advanced autolysis
|
Acceptable
|
 |
GTEX-1HCU8
|
61-70
|
Female
|
GTEX-1HCU8-2726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; adherent nubbins of fat up to ~1mm, rep delineated.
|
Acceptable
|
 |
GTEX-1HCU8
|
61-70
|
Female
|
GTEX-1HCU8-2826 |
Ileum
|
PAXgene |
3
|
4 pieces, glandular mucosa totallly autolyzed; target lymphoid aggregates are ~20% of residual tissue, rep. delineated.
|
Acceptable
|
 |
GTEX-1HCU8
|
61-70
|
Female
|
GTEX-1HCU8-2926 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1HCU8
|
61-70
|
Female
|
GTEX-1HCU8-3026 |
Brain - cortex
|
PAXgene |
1
|
4 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1HCU8
|
61-70
|
Female
|
GTEX-1HCU8-3126 |
Pituitary gland
|
PAXgene |
1
|
2 pieces, one a ~5mm portion of neurohypophysis (delineated); rest is adenohypophysis.
|
Acceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-0126 |
Spleen
|
PAXgene |
1
|
2 fragmented pieces; moderate number of polymorphs in the red pulp
|
Acceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; moderate lymphoid content consistent with lymphocytic (Hashimoto) thyroiditis
|
Acceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-0326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fatty tissue with less than 5% fibrous content and no mammary tissue
|
Acceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-0426 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; well trimmed; 5% dermal fat
|
Acceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-0526 |
Aorta
|
PAXgene |
1
|
6 pieces; no plaques; up to 1 mm adventitial stroma
|
Acceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-0626 |
Omentum
|
PAXgene |
0
|
2 pieces; <5% fibrous content
|
Acceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-0726 |
Pancreas
|
PAXgene |
1
|
2 pieces; rare foci of autolysis; <1% fat content
|
Acceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; submucosal glands in 3 pieces
|
Acceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected with small foci of submucosal stroma
|
Acceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces 3 with mucosa, 2 without muscularis propria; LCM
|
Unacceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-1126 |
Stomach
|
PAXgene |
1
|
6 pieces; all have mucosa only, no muscularis propria; LCM
|
Unacceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-1226 |
Ileum
|
PAXgene |
1
|
6 pieces; well preserved lymphoid nodules (circled) full thickness samples with excessive muscularis; LCM
|
Unacceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; all full thickness
|
Acceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; all full thickness. LCM
|
Unacceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-1526 |
Skin, leg
|
PAXgene |
1
|
6 fragmented pieces; moderate untrimmed subcutaneous fat; 5% dermal fat
|
Acceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-1626 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; <5% fibrous content; several holes in tissue
|
Acceptable
|
 |
GTEX-1HCU9
|
21-40
|
Male
|
GTEX-1HCU9-1726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 10% external and internal fat
|
Acceptable
|
 |