GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-1826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 7x6.5 & 8x6mm; No mammary tissue, only fibroadipose
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-2026 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 8x3mm; Subcutaneous adipose is well trimmed.
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-2126 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces, up to 3x2mm; 3 good well trimmed glands; smallest has 30% (0.5 sq mm) peripheral adipose .
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-2226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 9x8 & 10x8mm; Only small central 'unfixed' holes. Otherwise good specimen.
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-2326 |
Skin, leg
|
PAXgene |
1
|
6 pieces, up to 7x3mm; Subcutaneous adipose is well trimmed. Abundant sweat glands.
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-2426 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, 10x8 & 10x7.5mm; ~10% internal adipose in 1 piece
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-2526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, 4x3 & 4x4mm; No plaques, no extraneous tissue.
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-2626 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, 5x4 & 3x2.5mm; ~30% adipose in 1 piece.
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, 8x7 & 7x6mm; hemorrhages & fractures (traumatic?); moderately congested
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 9x6 & 9x5.5mm; focal fibrosis
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-0326 |
Pancreas
|
PAXgene |
1
|
2 pieces, 7x6 & 8x6mm; ~10% internal adipose; good islets
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-0426 |
Stomach
|
PAXgene |
1
|
6 pieces, up to 7x6mm; fundic mucosa, chronic gastritis with atrophy, no intestinal metaplasia
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-0726 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 4x2.5 & 3x2mm; no plaques; ~40% surrounding adipose, up to 1 mm thick
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-0826 |
Heart
|
PAXgene |
1
|
2 pieces, 7x7 & 7x7mm; ~10% internal adipose around blood vessels; contraction bands
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
4 pieces, up to 8x5mm; all muscularis, good specimen
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 7x5mm; 3 with muscle (target), 3 with fundic mucosa, no muscle
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-1426 |
Lung
|
PAXgene |
1
|
2 pieces, 8.5x5 & 7x5.5mm; emphysema; carbon laden macrophages focally in lymphoid nodule
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-1526 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, 9x6 & 9.5x6mm; good parenchyma, but 40-50% of aliquot is surrounding adipose tissue, up to 2.5 mm thick
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 6x2.5mm; Well-sampled muscularis (without mucosa); good ganglion cells.
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-1726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, up to 10x4mm; Good mucosal preservation.
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-1826 |
Ileum
|
PAXgene |
1
|
6 pieces, 8x4mm; up to Muscularis propria in all 6 pieces (not target tissue); lymphoid tissue in 4 of 6 .
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-1926 |
Prostate
|
PAXgene |
1
|
2 pieces, 7x6 & 9x5mm; Well preserved, focal papillary hyperplasia; focus of seminal vesicle 1x0.7mm in 1 piece
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-2026 |
Testis
|
PAXgene |
1
|
2 pieces, 8x7 & 11x6mm; Capsule present along one side of each piece (should be excluded); slightly reduced spermatogenesis
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-2126 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 8x8 & 8x6mm; Fibroadipose tissue (~30% fibrous stroma admixed); no fixation or traumatic artifacts
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-2226 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, 9x6 & 11.5x7mm; Contraction bands
|
Acceptable
|
|