GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-0526 |
Aorta
|
PAXgene |
1
|
6 pieces ~8x1.5mm
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-0626 |
Pancreas
|
PAXgene |
1
|
2 pieces, one ~9x9mm with attached 7x3mm adherent/interstital fat; the other ~6x2mm with adherent 11x6mm fat, delineated. Parenchyma well preserved, few Islets seen. Patchy fibrosis.
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-0726 |
Adrenal glands
|
PAXgene |
1
|
2 pieces one 8.5x7; one 8x2mm aliquot, all cortex. Smaller has attached ~7x7mm nubbin of fat
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces 9x1.5mm. Squamous mucosa, well preserved, is ~20% of thickness. Presumed switch with 0925 below.
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces ~9x3mm, all muscularis, presumed switch with 0825
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, ~8x4mm, all muscularis, excellent specimens
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1126 |
Stomach
|
PAXgene |
1
|
6 pieces, muscoa is ~20-25% of thickness; remarkably well-preserved
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1226 |
Omentum
|
PAXgene |
1
|
2 pieces ~8x7mm
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1626 |
Prostate
|
PAXgene |
1
|
2 pieces, diffuse glandular hyperplasia. Large adherent 6mm fatty nubbin attached to one aliquot, encircled/delineated
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1726 |
Liver
|
PAXgene |
1
|
2 pieces, ~9x9mm. Diffuse macrovesicular steatosis involves 90+ % of specimens, which are well - preserved
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, 8x5 & 10x7mm; Good red and white pulp
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0226 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 4x2 & 3x2mm; Occlusive fibrocalcific plaque. 40% extraneous adipose.
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0326 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, 8x5 & 13x6mm; No extraneous tissue.
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0426 |
Heart
|
PAXgene |
1
|
2 pieces, 9x8 & 10x9mm; No extraneous tissue.
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0526 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 10x6 & 11x7mm; No extraneous tissue.
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0626 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 10x2mm; No plaques. No extraneous tissue.
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0726 |
Lung
|
PAXgene |
1
|
2 pieces, 7.5x5 & 10x7mm; Vascular sclerosis, focal emphysema and fibrosis; focus of aspiration pneumonia
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0826 |
Pancreas
|
PAXgene |
1
|
2 pieces, 11x7 & 8x8mm; 10% adipose in one, none in the other; many islets
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, up to 7x2mm; Well sampled mucosa.
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 10x6mm; Well sampled muscularis propria
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-1126 |
Omentum
|
PAXgene |
1
|
2 pieces, 10x6 & 8x5.5mm; Artefactual fractures.
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
4 pieces, up to 6x1mm; All mucosa and thickened muscularis mucosa; no muscularis propria
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-1326 |
Colon, transverse
|
PAXgene |
1
|
5 pieces, up to 5x3mm; Mostly submucosa, variable amounts of mucosa and muscularis propria
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 10x4mm; All have muscularis propria (our target) but 5 of 6 have (unwanted) mucosa
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-1526 |
Stomach
|
PAXgene |
1
|
6 pieces, up to 12x5mm; Good well preserved mucosa.
|
Acceptable
|
|