GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1726 |
Nerve - tibial
|
PAXgene |
1
|
5 x 4.2 mm specimen, 30% intermingled adipose tissue. Center of one aliquot is poorly fixed (adipose).
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1826 |
Artery - tibial
|
PAXgene |
1
|
4.4 x 6.8 mm specimen.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1926 |
Urinary bladder
|
PAXgene |
1
|
Two of five sections poorly fixed/extreme separation. Mucosa sub-totally sloughed/degraded, about 31 microns thick where present
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-2026 |
Prostate
|
PAXgene |
1
|
13 x 9.7mm. Remarkably well preserved. Patchy glandular (papillary) hyperplasia, focal chronic prostatitis
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-2126 |
Testis
|
PAXgene |
1
|
12 x 8.8mm. Good spermatogenesis evident
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-2626 |
Thyroid gland
|
PAXgene |
1
|
Possible 0.4 x 0.6mm occult papillary ca, pending slide review. Patchy areas of peripheral adipose tissue are poorly fixed, tears and holes in section.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-3026 |
Coronary artery
|
PAXgene |
1
|
4.8 x 5.1mm specimen. ~20 circumferential atherosclerotic narrowing
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-0126 |
Skin, leg
|
PAXgene |
1
|
0-1. 9.7x3mm. Epithelium is ~115micronc, 3-5% of specimen thickness
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-0226 |
Adipose tissue
|
PAXgene |
1
|
1. 5.7x5.4mm. Small central area (~15-20%)poorly fixed
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-0326 |
Coronary artery
|
PAXgene |
1
|
Incorrect tissue. 2 pieces of coronary artery autolysis score 0-1. one piece about 50% fat
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-0425 |
Aorta
|
PAXgene |
1
|
1. 10x1.6mm. Clean specimen
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-0526 |
Lung
|
PAXgene |
1
|
1. 13.5x7mm. Patchy emphysematous changes, mild edema
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-0625 |
Esophagus - mucosa
|
PAXgene |
1
|
0-1. Epithelial thickness ranges from 245-445microns.
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
0-1. One of three pieces with poor central fixation, sizes average 9x4mm
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-0926 |
Spleen
|
PAXgene |
2
|
1-2. 14x11.5mm. Central areas of poor fixation
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-1026 |
Pancreas
|
PAXgene |
1
|
1. 11.5x10.4mm. Remarkably well-preserved
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-1426 |
Colon, transverse
|
PAXgene |
1
|
1. 9 x 3mm pieces (3) No mucosa visible(autolyzed or not); request block rotation; r/o embedding issue
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-1526 |
Stomach
|
PAXgene |
1
|
1. ~3x8mm pieces; mucosa is ~25% of specimen thickness. Overall epithelium is well-preserved though luminal surface is autolyzed
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-1626 |
Muscle, skeletal
|
PAXgene |
1
|
0-1. 12x7mm specimen.
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-1726 |
Nerve - tibial
|
PAXgene |
1
|
Pieces of adipose and connective tissue; no nerve present
|
Unacceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-1826 |
Artery - tibial
|
PAXgene |
1
|
Trace shreds of fibroadipose tissue; no artery present
|
Unacceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-1926 |
Urinary bladder
|
PAXgene |
1
|
1. 10 x 4mm pieces (3); urothelium remarkably well preserved, up to 6-70 microns thick
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-2025 |
Prostate
|
PAXgene |
1
|
1. 12 x 8.2mm. Mild glandular hyperplasia
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-2126 |
Testis
|
PAXgene |
2
|
1-2. 11.7 x 5 mm.
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-2626 |
Thyroid gland
|
PAXgene |
1
|
1. 13.2x8mm. A few central holes
|
Acceptable
|
|