GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-1426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; epithelium is partially sloughing, small focus of muscularis (not target); ectatic, thick-walled vessels c/w varices
|
Acceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; target musculairs
|
Acceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-1626 |
Liver
|
PAXgene |
1
|
2 pieces; cirrhosis, chronic inflammation, Mallory's hyaline, bile pigment and hepatocyte degeneration/necrosis
|
Unacceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-1726 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated mature fat, clusters of reactive mesothelial cells, mild chronic inflammation
|
Acceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-1826 |
Pancreas
|
PAXgene |
2
|
2 pieces; 10 and 40% fat and fibrous tissue, scattered chronic inflammatory cells
|
Acceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-1926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis, few pieces include small portion of fat (up to 10%)
|
Acceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-2026 |
Spleen
|
PAXgene |
2
|
2 pieces; some congestion
|
Acceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-2126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections, several sclerotic, arteriosclerosis, small portion of medulla
|
Acceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-2226 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; 1 piece includes 20% attachment of fat
|
Acceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-2326 |
Stomach
|
PAXgene |
3
|
6 pieces; fill thickness sections, mucosa largely autolyzed
|
Acceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections, mucosa largely autolyzed
|
Acceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-2526 |
Ileum
|
PAXgene |
2
|
5 pieces; autolyzed mucosa with scattered residual lymphoid aggregates, small focus of muscularis (not target)
|
Unacceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis
|
Acceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-2726 |
Vagina
|
PAXgene |
1
|
6 pieces
|
Acceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-2826 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces
|
Acceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-2926 |
Brain - cortex
|
PAXgene |
1
|
4 pieces
|
Acceptable
|
 |
GTEX-1HBPM
|
61-70
|
Female
|
GTEX-1HBPM-3026 |
Pituitary gland
|
PAXgene |
1
|
1 piece; ~80% adenohypophysis, ~20% neurohypophysis
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, no dermal fat; squamous epithelium is ~30-35 microns
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0226 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no significant dermal fat; squamous epithelium is ~35 microns
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, trace adherent fat
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no adherent fat; trace atherosis
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; ~10% interstitial fat/vascular elements
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0626 |
Coronary artery
|
PAXgene |
0
|
2 pieces, minute ((<1mm) probable branch (delineated). Excessive contaminating adherent fat.
|
Unacceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0726 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; ~20% fascia; rep delineated.
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0826 |
Heart
|
PAXgene |
1
|
2 pieces, diffuse lymphoid infiltrate with myocyte destruction c/w myocarditis.
Reviewed by NIH consult panel
|
Unacceptable
|
 |