GTEX-R45C
|
61-70
|
Female
|
GTEX-R45C-2126 |
Colon, transverse
|
PAXgene |
3
|
8 pieces up to 7.4x1.2 mm; mucosa completely autolyzed, muscularis slight to moderate autolysis
|
Acceptable
|
 |
GTEX-R45C
|
61-70
|
Female
|
GTEX-R45C-2326 |
Fallopian tube
|
PAXgene |
3
|
2 pieces, 6x2 & 3x3 mm; mucosa almost completely sloughed, wall slight to moderate autolysis
|
Acceptable
|
 |
GTEX-R45C
|
61-70
|
Female
|
GTEX-R45C-2426 |
Urinary bladder
|
PAXgene |
3
|
6 pieces up to 10x4 mm; mucosa completely sloughed, muscularis slight to moderate autolysis
|
Acceptable
|
 |
GTEX-R55E
|
21-40
|
Male
|
GTEX-R55E-2226 |
Urinary bladder
|
PAXgene |
3
|
6 pieces up to 8.6x5 mm; epithelium totally sloughed; muscle wall in good shape
|
Acceptable
|
 |
GTEX-R55E
|
21-40
|
Male
|
GTEX-R55E-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 6.7x2 mm; mucosa almost totally autolyzed; muscle slight to moderate fragmentation
|
Acceptable
|
 |
GTEX-R55F
|
51-60
|
Male
|
GTEX-R55F-0526 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces up to 8x2 mm; mucosa totally sloughed; only submucosa and muscularis mucosa remain
|
Acceptable
|
 |
GTEX-R55F
|
51-60
|
Male
|
GTEX-R55F-0726 |
Stomach
|
PAXgene |
3
|
6 pieces up to 11x3 mm; hemorrhagic and necrotic/autolyzed mucosa; muscle slightly autolyzed
|
Acceptable
|
 |
GTEX-R55F
|
51-60
|
Male
|
GTEX-R55F-0926 |
Urinary bladder
|
PAXgene |
3
|
6 pieces up to 8x3.4 mm; epithelium totally sloughed on all; muscle slightly autolyzed
|
Acceptable
|
 |
GTEX-R55F
|
51-60
|
Male
|
GTEX-R55F-1026 |
Prostate
|
PAXgene |
3
|
2 pieces, 10x10 mm; severe glandular autolysis, slight stromal autolysis
|
Acceptable
|
 |
GTEX-R55F
|
51-60
|
Male
|
GTEX-R55F-2126 |
Pancreas
|
PAXgene |
3
|
2 pieces, each 8x8 mm; 50% adipose in 1, 30% in the other;
|
Acceptable
|
 |
GTEX-R55F
|
51-60
|
Male
|
GTEX-R55F-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 8x2.5 mm; mucosa completely autolyzed; muscle slightly autolyzed
|
Acceptable
|
 |
GTEX-REY6
|
61-70
|
Male
|
GTEX-REY6-0226 |
Skin, leg
|
PAXgene |
3
|
6 pieces up to 7.4x5 mm; excessive subcutaneous adipose tissue over 50% of specimens; epidermis completely sloughed
|
Acceptable
|
 |
GTEX-REY6
|
61-70
|
Male
|
GTEX-REY6-1626 |
Spleen
|
PAXgene |
3
|
2 pieces 8x5 & 7x6 mm; severely congested
|
Acceptable
|
 |
GTEX-REY6
|
61-70
|
Male
|
GTEX-REY6-2026 |
Urinary bladder
|
PAXgene |
3
|
6 pieces up to 9x5 mm; mucosa sloughed; muscle in good shape
|
Acceptable
|
 |
GTEX-REY6
|
61-70
|
Male
|
GTEX-REY6-2226 |
Stomach
|
PAXgene |
3
|
6 pieces up to 11x3.8 mm; largely autolyzed mucosa, patchy preservation; muscle edematous; extensive chronic gastritis
|
Acceptable
|
 |
GTEX-REY6
|
61-70
|
Male
|
GTEX-REY6-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 6x2.7 mm; patchy preserved mucosa, otherwise autolyzed; muscle slight autolysis
|
Acceptable
|
 |
GTEX-RN5K
|
51-60
|
Female
|
GTEX-RN5K-0326 |
Lung
|
PAXgene |
3
|
2 aliquots, ~8x8mm. Severe congestion/hemorrhage, diffuse
|
Acceptable
|
 |
GTEX-RN5K
|
51-60
|
Female
|
GTEX-RN5K-0626 |
Stomach
|
PAXgene |
3
|
6 pieces, ~8x2mm. Mucosa with near-total autolysis and/or sloughed, ~30% of thickness
|
Acceptable
|
 |
GTEX-RN5K
|
51-60
|
Female
|
GTEX-RN5K-0726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, ~7x1.5mm. Mucosa nearly totally autolyzed and/or sloughed
|
Acceptable
|
 |
GTEX-RN5K
|
51-60
|
Female
|
GTEX-RN5K-2426 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces ~7x3mm, badly autolyzed
|
Acceptable
|
 |
GTEX-RN5K
|
51-60
|
Female
|
GTEX-RN5K-2526 |
Kidney - medulla
|
PAXgene |
3
|
3 aliquosts, one all cortex, one is medulla, cannot be retained as either
|
Unacceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-1326 |
Spleen
|
PAXgene |
3
|
2 aliquots, 7x7mm. Badly congested/autolyzed
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-2226 |
Prostate
|
PAXgene |
3
|
2 aliquots, ~10x7mm. Glands with near-total autolysis, patchy hyperplasia based on pattern, patchy chronic prostatitis
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-2426 |
Urinary bladder
|
PAXgene |
3
|
6 pieces ~6x4mm. All detrusor muscle: Urothelium completely autolyzed/sloughed
|
Acceptable
|
 |
GTEX-RNOR
|
51-60
|
Female
|
GTEX-RNOR-2026 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 8x3 mm; mucosa totally autolyzed; muscularis slightly autolyzed; 0.6 mm squamous "floater"
|
Acceptable
|
 |