GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa completely autolyzed/sloughted
|
Acceptable
|
 |
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-2526 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, minimal dermal fat; squamous epithelium is ~60-70 microns
|
Acceptable
|
 |
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-2626 |
Prostate
|
PAXgene |
1
|
2 pieces, glands mildly-moderately autolyzed
|
Acceptable
|
 |
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-2726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, no ductal elements, all fibroadipose tissue
|
Acceptable
|
 |
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-2826 |
Testis
|
PAXgene |
2
|
2 pieces, autolysis variable from mild--moderate/severe. Spermatogenesis present, but appears reduced
|
Acceptable
|
 |
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-2926 |
Pituitary gland
|
PAXgene |
1
|
1 piece, 60% adenohypophysis, 40 % neurohypophysis (delineated)
|
Acceptable
|
 |
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-3026 |
Brain - cortex
|
PAXgene |
1
|
2 pieces, no histologic abnormality
|
Acceptable
|
 |
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-3126 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces Purkinje cells visualized; evidence of antemortem hypoxia.
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-0126 |
Spleen
|
PAXgene |
1
|
2 pieces; slight congestion
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-0326 |
Stomach
|
PAXgene |
1
|
6 pieces; mucosa absent on all 6 pieces, can only be used for muscularis propria assessment
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-0426 |
Pancreas
|
PAXgene |
1
|
2 pieces; 10% individual fat cells diffusely distributed amonst parenchyma
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-0526 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces; well preserved, well dissected
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-0626 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces well dissected
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-0726 |
Vagina
|
PAXgene |
0
|
6 pieces
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-0826 |
Gastroesophageal junction
|
PAXgene |
0
|
6 pieces; most are small, e.g. 3x2mm, largest 6x3mm
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-0926 |
Uterus
|
PAXgene |
1
|
2 pieces; endo and ectocervix, not uterus
|
Unacceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-1026 |
Ovary
|
PAXgene |
0
|
2 pieces; numerous corpora albicans comprise 50 and 25% of samples
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-1126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces of skin
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-1226 |
Omentum
|
PAXgene |
1
|
2 pieces; large pieces with interior holes
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-1326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; atrophic ducts and lobular units; abundant fat
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 5 of 6 pieces with mucosa [not target]
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces well dissected full thickness of colon
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-1626 |
Ileum
|
PAXgene |
1
|
6 pieces; abundant lymphoid tissue [delineated]
|
Acceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-1726 |
Skin, leg
|
PAXgene |
0
|
6 pieces; internal fatty island make up 10%
|
Acceptable
|
 |