GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-0426 |
Lung
|
PAXgene |
3
|
2 9x7.5mm aliquots. Diffuse infiltrative process, suspect squamous carcinoma/fibrosis. Severe autolysis hampers evaluation; need slides to review
|
Unacceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-0926 |
Spleen
|
PAXgene |
3
|
2 ~10x9mm aliquots, marked congestion of red pulp
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-1026 |
Pancreas
|
PAXgene |
3
|
2 ~10x9mm aliquots, marked diffuse saponification/autolysis
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2126 |
Stomach
|
PAXgene |
3
|
6 ~8.5x2mm pieces; mucosa nearly totally autolyzed
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2226 |
Kidney - medulla
|
PAXgene |
3
|
2 ~10x9mm aliquots. Tubules badly autolyzed
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2326 |
Kidney - cortex
|
PAXgene |
3
|
6 ~8x3.5mm pieces, marked tubular autolysis
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2426 |
Colon, transverse
|
PAXgene |
3
|
6 ~8x2mm pieces. Mucosa totally autolyzed, many have adherent fat/fibrovascular tissue fragments
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2626 |
Urinary bladder
|
PAXgene |
3
|
8 ~7.5x2.5mm pieces. Urothelium completely sloughed
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2926 |
Uterus
|
PAXgene |
3
|
2 ~9x8mm aliquots. No viable endometrium; completely autolyzed focus along edge of one aliquot
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-3026 |
Fallopian tube
|
PAXgene |
3
|
2 ~5x4mm aliquots, luminal mucosa totally autolyzed
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-0826 |
Pancreas
|
PAXgene |
3
|
2 ~ 9x8.5mm aliquots, diffuse saponification, focally calcified
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-0926 |
Kidney - cortex
|
PAXgene |
3
|
6 ~6x4mm pieces, tubules badly autolyzed
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-1026 |
Kidney - medulla
|
PAXgene |
3
|
2 ~ 7.5x7mm aliquots, both with glomeruli, must be re-classified as renal cortex, also large fragment (10x2mm) of artery in one aliquot with Mockeberg’s sclerosis
|
Unacceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-2326 |
Stomach
|
PAXgene |
3
|
6 ~8.5x2.5mm pieces, epithelial portions of mucosa with near total autolysis & partly sloughed, 20-30% of thickness
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-2426 |
Colon, transverse
|
PAXgene |
3
|
6 ~8.5x1.5mm pieces, epithelial portions of mucosa with near total total autolysis.
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-2526 |
Adrenal glands
|
PAXgene |
3
|
2 ~20x10mm aliquots, all cortex, moderately-severely autolyzed
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-2626 |
Vagina
|
PAXgene |
3
|
6 ~8x4mm aliquots, deep fat present on most; squamous mucosa is ~1-2% of thickness, partially sloughing
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-2726 |
Urinary bladder
|
PAXgene |
3
|
6 ~ 8.5x3mmpieces, urothelium nearly totally sloughed, where present badly autolyzed; evidence of extensive chronic cystitis, uncertain etiology
|
Acceptable
|
|
GTEX-R3RS
|
41-50
|
Female
|
GTEX-R3RS-1526 |
Spleen
|
PAXgene |
3
|
2 pieces, both 6.8x6.5 mm; congested and autolyzed
|
Acceptable
|
|
GTEX-R3RS
|
41-50
|
Female
|
GTEX-R3RS-1626 |
Pancreas
|
PAXgene |
3
|
2 pieces, 7x5 & 6x5 mm; extensive parenchymal autolysis focally severe
|
Acceptable
|
|
GTEX-R3RS
|
41-50
|
Female
|
GTEX-R3RS-1926 |
Stomach
|
PAXgene |
3
|
6 pieces up to 6.8x3.6 mm; mucosa severely autolyzed; muscle moderately autolyzed
|
Acceptable
|
|
GTEX-R3RS
|
41-50
|
Female
|
GTEX-R3RS-2126 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 8.3x2.6 mm; mucosa completely autolyzed; muscle moderately autolyzed;
|
Acceptable
|
|
GTEX-R45C
|
61-70
|
Female
|
GTEX-R45C-0726 |
Thyroid gland
|
PAXgene |
3
|
2 pieces, 8x7 & 7x7 mm; partly nodular
|
Acceptable
|
|
GTEX-R45C
|
61-70
|
Female
|
GTEX-R45C-1726 |
Adrenal glands
|
PAXgene |
3
|
2 pieces 11x9 & 10x4 mm; >90% adipose, only a thin rim of adrenal (autolyzed) present
|
Unacceptable
|
|
GTEX-R45C
|
61-70
|
Female
|
GTEX-R45C-2026 |
Stomach
|
PAXgene |
3
|
6 pieces up to 9x4 mm; mucosa largely autolyzed; muscularis slight autolysis
|
Acceptable
|
|