GTEX-15ER7
|
21-40
|
Female
|
GTEX-15ER7-2826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; predominantly muscularis, some submucosa, few collections of lymphocytes
|
Acceptable
|
|
GTEX-15ER7
|
21-40
|
Female
|
GTEX-15ER7-2926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness
|
Acceptable
|
|
GTEX-15ER7
|
21-40
|
Female
|
GTEX-15ER7-3226 |
Pituitary gland
|
PAXgene |
2
|
2 pieces; predominantly adenohypophysis with small focus of neurohypophysis (marked)
|
Acceptable
|
|
GTEX-15ETS
|
41-50
|
Female
|
GTEX-15ETS-2126 |
Ileum
|
PAXgene |
2
|
6 pieces, target lymphoid aggregates are ~20% tissue, rep foci delineated
|
Acceptable
|
|
GTEX-15ETS
|
41-50
|
Female
|
GTEX-15ETS-2226 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa layer up to ~0.4mm variably but generally poorly preserved/sloughing
|
Acceptable
|
|
GTEX-15EU6
|
51-60
|
Male
|
GTEX-15EU6-1826 |
Ileum
|
PAXgene |
2
|
6 pieces, target lymphoid aggregates are ~5-10%, delineated
|
Acceptable
|
|
GTEX-15EU6
|
51-60
|
Male
|
GTEX-15EU6-2126 |
Prostate
|
PAXgene |
2
|
2 pieces, glandular elements with moderate-advanced autolysis
|
Acceptable
|
|
GTEX-15F5U
|
41-50
|
Male
|
GTEX-15F5U-0126 |
Spleen
|
PAXgene |
2
|
2 fragmented pieces; moderate congestion
|
Acceptable
|
|
GTEX-15F5U
|
41-50
|
Male
|
GTEX-15F5U-1226 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; 1 piece has no muscularis
|
Acceptable
|
|
GTEX-15F5U
|
41-50
|
Male
|
GTEX-15F5U-1426 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; all have mucosa (not target) as well as muscularis (target) LCM
|
Acceptable
|
|
GTEX-15FZZ
|
21-40
|
Female
|
GTEX-15FZZ-0126 |
Spleen
|
PAXgene |
2
|
2 pieces; moderate congestion
|
Acceptable
|
|
GTEX-15FZZ
|
21-40
|
Female
|
GTEX-15FZZ-1726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; 1 is without mucosa
|
Acceptable
|
|
GTEX-15G19
|
61-70
|
Male
|
GTEX-15G19-0626 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; mild interstitial fibrosis
|
Acceptable
|
|
GTEX-15G19
|
61-70
|
Male
|
GTEX-15G19-0726 |
Lung
|
PAXgene |
2
|
2 pieces; marked congestion; sloughing bronchial epithelium; collapsed alveolar spaces with many alveolar macrophages
|
Acceptable
|
|
GTEX-15G19
|
61-70
|
Male
|
GTEX-15G19-1226 |
Liver
|
PAXgene |
2
|
2 pieces
|
Acceptable
|
|
GTEX-15G19
|
61-70
|
Male
|
GTEX-15G19-1326 |
Testis
|
PAXgene |
2
|
2 pieces; spermatogenesis present; congestion
|
Acceptable
|
|
GTEX-15G19
|
61-70
|
Male
|
GTEX-15G19-1426 |
Pancreas
|
PAXgene |
2
|
2 pieces; sloughing ductal epithelium; residual islets (rep outlined)
|
Acceptable
|
|
GTEX-15G19
|
61-70
|
Male
|
GTEX-15G19-1526 |
Stomach
|
PAXgene |
2
|
6 pieces; full thickness sections with mucosa up to 0.8mm, sloughing surface epithelium, moderate autolysis
|
Acceptable
|
|
GTEX-15G19
|
61-70
|
Male
|
GTEX-15G19-1626 |
Spleen
|
PAXgene |
2
|
2 pieces; marked congestion
|
Acceptable
|
|
GTEX-15G19
|
61-70
|
Male
|
GTEX-15G19-1726 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; renal cortex with scattered hyalinized glomeruli (rep outlined); sloughing distal tubular epithelium
|
Acceptable
|
|
GTEX-15G19
|
61-70
|
Male
|
GTEX-15G19-2326 |
Prostate
|
PAXgene |
2
|
2 pieces; fibromuscular stroma and glands with massive sloughing of glandular epithelium, scattered corpora amylacea
|
Acceptable
|
|
GTEX-15G19
|
61-70
|
Male
|
GTEX-15G19-2826 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces; mild to moderate autolysis
|
Acceptable
|
|
GTEX-15G19
|
61-70
|
Male
|
GTEX-15G19-2926 |
Brain - cortex
|
PAXgene |
2
|
4 pieces; mild to moderate autolysis
|
Acceptable
|
|
GTEX-15G19
|
61-70
|
Male
|
GTEX-15G19-3026 |
Pituitary gland
|
PAXgene |
2
|
1 piece; mostly adenohypophysis
|
Acceptable
|
|
GTEX-15RJ7
|
41-50
|
Male
|
GTEX-15RJ7-1126 |
Stomach
|
PAXgene |
2
|
6 pieces; muscularis and submucosa only (full thickness sections preferred with trimming of muscularis as necessary)
|
Unacceptable
|
|