GTEX-11ZUS
|
21-40
|
Male
|
GTEX-11ZUS-2426 |
Ileum
|
PAXgene |
3
|
4 pieces, severely autolyzed mucosa with focal prominent lymphoid tissue and fragments of muscularis (not target)
|
Unacceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-1926 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa too autolyzed for GTEx; muscularis variable in amount, might be useful for TMA or laser capture
|
Unacceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-2126 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa=3; muscularis=1; only muscle useful for GTEx
|
Acceptable
|
 |
GTEX-1212Z
|
61-70
|
Male
|
GTEX-1212Z-1926 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, severely autolyzed mucosa
|
Unacceptable
|
 |
GTEX-1212Z
|
61-70
|
Male
|
GTEX-1212Z-2326 |
Stomach
|
PAXgene |
3
|
6 pieces, severely autolyzed mucosa and muscularis
|
Acceptable
|
 |
GTEX-12584
|
41-50
|
Male
|
GTEX-12584-1626 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces; completely sloughed epithelium
|
Unacceptable
|
 |
GTEX-12584
|
41-50
|
Male
|
GTEX-12584-1726 |
Pancreas
|
PAXgene |
3
|
2 pieces
|
Unacceptable
|
 |
GTEX-12584
|
41-50
|
Male
|
GTEX-12584-2226 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces; tubules severely autolyzed
|
Acceptable
|
 |
GTEX-12584
|
41-50
|
Male
|
GTEX-12584-2326 |
Stomach
|
PAXgene |
3
|
6pieces; mucosa completely autolyzed; muscle moderately autolyzed
|
Acceptable
|
 |
GTEX-12584
|
41-50
|
Male
|
GTEX-12584-2426 |
Ileum
|
PAXgene |
3
|
6 pieces; mucosa completely autolyzed; insufficient lymphoid tissue
|
Unacceptable
|
 |
GTEX-12584
|
41-50
|
Male
|
GTEX-12584-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa severely autolyzed; muscularis preserved (1); chronicly inflamed mucosa consistent with history of ulcerative colitis
|
Acceptable
|
 |
GTEX-1269C
|
61-70
|
Female
|
GTEX-1269C-1526 |
Pancreas
|
PAXgene |
3
|
2 pieces, ~10% fat, islets reduced in number and some with amyloid-like material
|
Acceptable
|
 |
GTEX-1269C
|
61-70
|
Female
|
GTEX-1269C-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, muscularis and severely autolyzed mucosa
|
Unacceptable
|
 |
GTEX-12KS4
|
21-40
|
Male
|
GTEX-12KS4-1826 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, moderate-severe autolysis; glomeruli seen in all sections
|
Acceptable
|
 |
GTEX-12KS4
|
21-40
|
Male
|
GTEX-12KS4-2026 |
Stomach
|
PAXgene |
3
|
6 pieces mucosa ~0.7mm, up ~30% total thickness, but severly autolyzed
|
Acceptable
|
 |
GTEX-12KS4
|
21-40
|
Male
|
GTEX-12KS4-2226 |
Ileum
|
PAXgene |
3
|
4 pieces, mucosa autolyzed, ~20% residual lymphoid elements present
|
Acceptable
|
 |
GTEX-12WS9
|
51-60
|
Female
|
GTEX-12WS9-1926 |
Ileum
|
PAXgene |
3
|
4 pieces, mucosa badly autolyzed; ~10% residual lymphod aggregates present, rep. delineated
|
Acceptable
|
 |
GTEX-12WS9
|
51-60
|
Female
|
GTEX-12WS9-2026 |
Spleen
|
PAXgene |
3
|
2 pieces, marked congestion
|
Acceptable
|
 |
GTEX-12WS9
|
51-60
|
Female
|
GTEX-12WS9-2326 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, markedly autolzyed; glomeruli present
|
Acceptable
|
 |
GTEX-12WS9
|
51-60
|
Female
|
GTEX-12WS9-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa is ~30 % thickness but epithelial component is totaly autolyzed
|
Acceptable
|
 |
GTEX-12WSA
|
61-70
|
Male
|
GTEX-12WSA-1926 |
Spleen
|
PAXgene |
3
|
2 pieces, marked congestion
|
Acceptable
|
 |
GTEX-12WSA
|
61-70
|
Male
|
GTEX-12WSA-2126 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present but badly autolyzed
|
Acceptable
|
 |
GTEX-12WSA
|
61-70
|
Male
|
GTEX-12WSA-2326 |
Stomach
|
PAXgene |
3
|
6 pieces, moderate to generally severe mucosal autolysis
|
Acceptable
|
 |
GTEX-12WSA
|
61-70
|
Male
|
GTEX-12WSA-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa is badly autolyzed, ~20% of thickness
|
Acceptable
|
 |
GTEX-12WSA
|
61-70
|
Male
|
GTEX-12WSA-2626 |
Ileum
|
PAXgene |
3
|
4 pieces, mucosa markedly autolyzed; lymphoid aggregates~20% lympphoid aggregates
|
Acceptable
|
 |