GTEX-13CZU
|
21-40
|
Male
|
GTEX-13CZU-0226 |
Thyroid gland
|
PAXgene |
0
|
2 pieces; 10% fat and lymphoid nodule in each at edge [annotated]
|
Acceptable
|
 |
GTEX-13CZU
|
21-40
|
Male
|
GTEX-13CZU-1226 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; up to 3 hair follicles in each piece; well trimmed; <1% intradermal fat
|
Acceptable
|
 |
GTEX-13CZU
|
21-40
|
Male
|
GTEX-13CZU-1726 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces; well trimmed; 20% internal fat in one
|
Acceptable
|
 |
GTEX-13CZV
|
61-70
|
Male
|
GTEX-13CZV-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; moderate atrophy in 1; 10% internal fat
|
Acceptable
|
 |
GTEX-13CZV
|
61-70
|
Male
|
GTEX-13CZV-0826 |
Aorta
|
PAXgene |
1
|
6 pieces; no plaques; periaortic fibrofatty tissue in 2
|
Acceptable
|
 |
GTEX-13CZV
|
61-70
|
Male
|
GTEX-13CZV-2626 |
Ileum
|
PAXgene |
2
|
6 pieces; lymphoid tissue in all [annotated]
|
Acceptable
|
 |
GTEX-13FH7
|
51-60
|
Female
|
GTEX-13FH7-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; all full thickness, but mucosa is limited in some
|
Acceptable
|
 |
GTEX-13FHO
|
61-70
|
Male
|
GTEX-13FHO-0526 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; both are partially encased in fat, up to 2mm (20% and 40% internal and external fat combined)
|
Acceptable
|
 |
GTEX-13FHO
|
61-70
|
Male
|
GTEX-13FHO-2326 |
Kidney - cortex
|
PAXgene |
1
|
4 pieces; glomeruli in all sections, some interstitial fibrosis and vascular thickening, rare sclerotic glomerulus
|
Acceptable
|
 |
GTEX-13FLV
|
41-50
|
Male
|
GTEX-13FLV-0826 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; glomeruli in all sections, increased mesangial matirx and rare sclerotic glomerulus, some vascular thickening, interstitial and periglomerular fibrosis
|
Acceptable
|
 |
GTEX-13FLW
|
51-60
|
Male
|
GTEX-13FLW-2526 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; fat admixed with 30% and 50% fibrovascular tissue and in one piece, nerve
|
Acceptable
|
 |
GTEX-13FLW
|
51-60
|
Male
|
GTEX-13FLW-2626 |
Muscle, skeletal
|
PAXgene |
1
|
3 pieces; small central area of fat and vessels in one piece, rare focus of atrophic fibers
|
Acceptable
|
 |
GTEX-13FLW
|
51-60
|
Male
|
GTEX-13FLW-2726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; central defect in one piece, predominantly fat with ~10% fibrous tissue in one piece, no epithelial component
|
Acceptable
|
 |
GTEX-13FTW
|
41-50
|
Male
|
GTEX-13FTW-2026 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa/submucosa with pronounced lymphoid component in 3 of 6
|
Acceptable
|
 |
GTEX-13FTX
|
21-40
|
Female
|
GTEX-13FTX-1126 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; central defect in one piece, fat and fibrous tissue with few ductal/lobular elements, small portion of skeletal muscle
|
Acceptable
|
 |
GTEX-13FTY
|
41-50
|
Female
|
GTEX-13FTY-2226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; oversized with central defect in one piece, fibrocystic change
|
Acceptable
|
 |
GTEX-13FTY
|
41-50
|
Female
|
GTEX-13FTY-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; muscularis with residual fat and submucosa up to ~20% in some pieces
|
Acceptable
|
 |
GTEX-13FTZ
|
61-70
|
Male
|
GTEX-13FTZ-1226 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces; glomeruli in all sections, some sclerotic; tubules very autolyzed, cannot distinguish from acute tubular necrosis; arteriosclerosis
|
Acceptable
|
 |
GTEX-13FXS
|
51-60
|
Male
|
GTEX-13FXS-0126 |
Adipose tissue
|
PAXgene |
1
|
2 pieces (fragmented); oversized with central defects in one piece
|
Acceptable
|
 |
GTEX-13FXS
|
51-60
|
Male
|
GTEX-13FXS-1826 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections, rare collections of lymphocytes, mild interstitial fibrosis, some vascular thickening, few sections include portion of medulla
|
Acceptable
|
 |
GTEX-13JUV
|
41-50
|
Female
|
GTEX-13JUV-2826 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; some central defects in tissue (? poor fixation)
|
Acceptable
|
 |
GTEX-13JVG
|
61-70
|
Male
|
GTEX-13JVG-1826 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections, few sclerotic, interstitial fibrosis
|
Acceptable
|
 |
GTEX-13JVG
|
61-70
|
Male
|
GTEX-13JVG-2226 |
Stomach
|
PAXgene |
3
|
6 pieces; predominantly mucosa with small portion of muscularis in some pieces
|
Acceptable
|
 |
GTEX-13N11
|
41-50
|
Female
|
GTEX-13N11-1126 |
Uterus
|
PAXgene |
0
|
2 pieces; myometrium only in this section
|
Acceptable
|
 |
GTEX-13N2G
|
51-60
|
Male
|
GTEX-13N2G-1226 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; congestion; missing and attenuation of squamous epithelium in places
|
Acceptable
|
 |