GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-0626 |
Kidney - medulla
|
PAXgene |
1
|
2 pieces, ~8x5mm. NOTE: Each aliquot is ~40% cortex
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-0926 |
Stomach
|
PAXgene |
1
|
6 pieces ~8x3mm. Mucosa well-presereved but only focally present in 4 aliquots, where prsent ~20% of thickness
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces 7x4mm. No mucosa, just muscle. May be used once relabeled
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces ~7x4mm. Mucosa unusually well-preserved; ~10% of thickness
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1426 |
Prostate
|
PAXgene |
1
|
2 pieces, no prostate present, only fat/vascular tissue, unknown provenance.
|
Unacceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1726 |
Liver
|
PAXgene |
1
|
2 pieces ~8x7mm. Minimal steatosis
|
Acceptable
|
|
GTEX-TKQ2
|
41-50
|
Male
|
GTEX-TKQ2-1826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 7x7mm. Ductal elements (rare) present, representive ones encircled.
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-0126 |
Spleen
|
PAXgene |
1
|
2 pieces 9x8 & 9x8 mm; moderate congestion
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces 7x6 & 9x7 mm; uniform structure
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-0326 |
Lung
|
PAXgene |
1
|
2 pieces: 9x7 & 8x5 mm; panacinar emphysema, no fibrosis or inflammation
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-0426 |
Aorta
|
PAXgene |
1
|
6 pieces up to 7x1 mm; adventitial fibrous tissue up to 2 mm thick
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-0526 |
Pancreas
|
PAXgene |
1
|
2 pieces 7x5 & 10x6 mm; good acinar and islet preservation; one piece has ~20% adipose
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-0626 |
Urinary bladder
|
PAXgene |
1
|
6 pieces up to 7x5 mm; partly sloughed mucosa
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-0726 |
Cervix - endocervix
|
PAXgene |
1
|
2 pieces 9x7 & 8x6 mm; good glands and surface epithelium
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-0826 |
Cervix - ectocervix
|
PAXgene |
1
|
2 pieces 7x3 & 6x3 mm; limited mucosa on long piece
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-0926 |
Ovary
|
PAXgene |
1
|
2 pieces 9x6 & 9x6 mm; corppora albicantia
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-1026 |
Fallopian tube
|
PAXgene |
1
|
2 pieces 8x5 & 4x4 mm; larger piece is good tube, smaller is fibrovascular tissue with no tubal elements
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-1126 |
Vagina
|
PAXgene |
1
|
6 pieces up to 7x4 mm; good mucosal preservation
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-1226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces 11x9 & 9x8 mm; atrophic ductal mammary tissue, mostly adipose; largest piece has a central hollow defect
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 8x3 mm; good mucosal preservation
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 10x4 mm; good muscle
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-1526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 8x2 mm; largest piece has an ulcer with acute inflammation
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-1726 |
Artery - tibial
|
PAXgene |
1
|
2 pieces 5x2 & 4x2 mm; small vessels, arteries and veins, (1x0.6 mm & 0.8 mm) embedded in ~60 & ~90% adipose
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-1826 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces 12x10 & 10x7 mm; larger piece has numerous tissue artifacts, e.g. fractures; smaller piece has 3x3 mm adipose on one surface
|
Acceptable
|
|
GTEX-TML8
|
41-50
|
Female
|
GTEX-TML8-1926 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 8x3 mm; subcutaneous fat well trimmed; numerous tissue fractures in dermis
|
Acceptable
|
|