GTEX-1S5VW
|
61-70
|
Male
|
GTEX-1S5VW-3226 |
Brain - cortex
|
PAXgene |
1
|
4 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, trace dermal fat; squamous epithelium is ~30-40 microns
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~40% fascia, sample carefully, rep delineated
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-0326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, pristine specimen
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, trace adherent fibrous tissue; no atherosis
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-0526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, interstitial fat/vascular elements are ~10% of tissue, rep delineated
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, adherent fat/vascular elements on one edge, ~25% of specimen; sample carefully
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
2 pieces, confirmed muscularis, mild reactive changes
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.4mm, ~15% thickness. A few submucosal mucus glands, rep delineated
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-0926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis, trace 'contaminant' mucosa
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1026 |
Omentum
|
PAXgene |
1
|
2 pieces, ~10-15% fascia/mesothelial hyperplasia
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1126 |
Aorta
|
PAXgene |
1
|
6 pieces, trace atherosis
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1226 |
Stomach
|
PAXgene |
1
|
6 pieces, mucosa up to ~0.8mm, partly denuded but well preserved, ~20% thickness
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1326 |
Ileum
|
PAXgene |
1
|
6 pieces, target lymphoid aggregates are ~20% of tissue, rep delineated; good specimen
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa up to ~0.4mm, ~10% thickness
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1626 |
Prostate
|
PAXgene |
1
|
2 pieces, glandular hyerplasia
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1726 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis present, normal levels
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1826 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, adherent dermal fat ,~0.7mm; squamous epithelium is ~40-50 microns
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1926 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces, ~80% gland/duct parenchyma; rest is gland stroma
|
Acceptable
|
 |
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-2026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, gynecomastoid stromal hyperplasia; focal peripheral nerve/vascular elements, delineated
|
Acceptable
|
 |
GTEX-1S831
|
21-40
|
Male
|
GTEX-1S831-0126 |
Muscle, skeletal
|
PAXgene |
2
|
2 pieces; interstitial lymphocytes (myositis?); small foci of fibrovascular and adipose tissue (outlined)
|
Acceptable
|
 |
GTEX-1S831
|
21-40
|
Male
|
GTEX-1S831-0226 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed skin with mostly periadnexal fat; 43 micron thick epidermis
|
Acceptable
|
 |
GTEX-1S831
|
21-40
|
Male
|
GTEX-1S831-0326 |
Adipose tissue
|
PAXgene |
1
|
2 fragmented pieces; mature adipose tissue
|
Acceptable
|
 |
GTEX-1S831
|
21-40
|
Male
|
GTEX-1S831-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; ~10% internal/external fat (arrows)
|
Acceptable
|
 |