GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0326 |
Heart
|
PAXgene |
1
|
2 pieces 8x6 & 7x7 mm; contraction bands; no fibrosis or fat
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0426 |
Aorta
|
PAXgene |
1
|
6 pieces up to 9x2 mm; minimal plaque; minimal adventitial adipose
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0526 |
Adrenal glands
|
PAXgene |
1
|
2 pieces 8x6 & 7x7 mm; cortex; one has ~30% adipose
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0626 |
Lung
|
PAXgene |
1
|
2 pieces 11x4 & 7x7 mm; patchy emphysema and fibrosis; no inflammation
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 7x4 mm; all have mucosa, no muscularis propria
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 8x4 mm; 5 have mucosa and muscularis propria; 1 has only muscularis
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0926 |
Stomach
|
PAXgene |
1
|
6 pieces up to 6x4 mm; 3 have mainly mucosa, 1 largely muscle
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1026 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 6x3 mm; 3 have mucosa without muscularis, 3 have muscularis without mucosa
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1126 |
Prostate
|
PAXgene |
1
|
2 pieces 9x7 & 8x7 mm; hyperplasia; one piece with ~30% adipose7on one side
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1326 |
Testis
|
PAXgene |
1
|
2 pieces 8x7 & 8x6 mm; moderately reduced spermatogenesis
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1426 |
Pancreas
|
PAXgene |
1
|
2 pieces 11x4 & 9x7 mm; mild patchy fibrosis; ~10% adipose at one edge; scattered adipose in parenchyma
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces ~2 mm diameter; no lesions; cleaned of adipose
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces 6x3 & 5x3 mm; virtually fat free;
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1826 |
Adipose tissue
|
PAXgene |
1
|
pieces 10x5 & 11x9 mm; adipose tissue and an embedded 3x1 mm nerve
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1926 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 8x2 mm; most subcutaneous adipose removed; considerable tissue fracture
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0326 |
Coronary artery
|
PAXgene |
1
|
1 aliquot ~3x3mm, 90+% fat/myocardium surrounding 0.5x1mm vessel, too small for accurate isolation
|
Unacceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0426 |
Heart
|
PAXgene |
1
|
2 pieces, ~6x6mm, mimimal ischemic changes
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0526 |
Lung
|
PAXgene |
1
|
2 pieces ~9x4mm, mild-moderate emphysematous changes
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, ~8x7mm. Good clean specimens
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0726 |
Aorta
|
PAXgene |
1
|
6 pieces, ~8x1mm, no atherosclerosis
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces ~7x7mm
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1226 |
Liver
|
PAXgene |
1
|
2 pieces ~6x6mm, no steatosis
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces ~ 10x8mm. Large areolar ductal units, fibrotic stroma
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1626 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, all fat, not adrenal, not suitable for analysis
|
Unacceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1926 |
Vagina
|
PAXgene |
1
|
6 pieces, ~7x3mm, squamous mucosa is ~5-10% thickness
|
Acceptable
|
|