GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; trace 'contaminant squamous mcuosa, ~5-10% total, rep delineated
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.2mm, 10-15% thickness
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, GEJ mucosa, not correct site, reflux inflammation present. prominent mucus glands delineated.
|
Unacceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1226 |
Stomach
|
PAXgene |
1
|
6 pieces, muscularis only, mucosa sloughed, presumed autolyzed
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1326 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, adherent nubbins dermal fat up to ~5mm, rep delineated; squamous epithelium is ~60-70 microns
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1426 |
Ileum
|
PAXgene |
3
|
6 pieces, glandular mucosa completely autolyzed, target lymphoid aggregates are ~10-20% tissue
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, glandular mucosa up to ~0.2mm, partially sloughing
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis.
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1726 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, trace interstitial fat
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1826 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, nerve is ~70% of specimen (delineated) rest is adherent/interstitial fat
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1926 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no atherosis/adherent fat
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-2026 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, barely trace fascia
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-2126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no adherent fat; squamous epithelium is ~35-45 microns
|
Acceptable
|
 |
GTEX-1H1DF
|
41-50
|
Female
|
GTEX-1H1DF-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed; 5% dermal fat
|
Acceptable
|
 |
GTEX-1H1DF
|
41-50
|
Female
|
GTEX-1H1DF-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 1 with 10% fibrous content
|
Acceptable
|
 |
GTEX-1H1DF
|
41-50
|
Female
|
GTEX-1H1DF-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; well trimmed; 10% internal and external fat
|
Acceptable
|
 |
GTEX-1H1DF
|
41-50
|
Female
|
GTEX-1H1DF-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; well trimmed; no lesions
|
Acceptable
|
 |
GTEX-1H1DF
|
41-50
|
Female
|
GTEX-1H1DF-0526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; moderate atrophy & fibrosis
|
Acceptable
|
 |
GTEX-1H1DF
|
41-50
|
Female
|
GTEX-1H1DF-0626 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 50% internal fibrofatty content
|
Acceptable
|
 |
GTEX-1H1DF
|
41-50
|
Female
|
GTEX-1H1DF-0726 |
Heart
|
PAXgene |
2
|
2 pieces; moderate congestion; fragmented myofibers; areas of hypereosinophilia
|
Acceptable
|
 |
GTEX-1H1DF
|
41-50
|
Female
|
GTEX-1H1DF-0826 |
Aorta
|
PAXgene |
2
|
6 pieces; minimal plaque; well trimmed
|
Acceptable
|
 |
GTEX-1H1DF
|
41-50
|
Female
|
GTEX-1H1DF-0926 |
Coronary artery
|
PAXgene |
1
|
2 pieces: 1 with 75% occlusion with eccentric plaque; other has concentric plaque
|
Acceptable
|
 |
GTEX-1H1DF
|
41-50
|
Female
|
GTEX-1H1DF-1026 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; well dissected
|
Acceptable
|
 |
GTEX-1H1DF
|
41-50
|
Female
|
GTEX-1H1DF-1126 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed; 20% dermal fat
|
Acceptable
|
 |
GTEX-1H1DF
|
41-50
|
Female
|
GTEX-1H1DF-1226 |
Lung
|
PAXgene |
2
|
2 pieces; moderate congestion and severe pulmonary edema
|
Acceptable
|
 |