GTEX-S4Q7
|
21-40
|
Male
|
GTEX-S4Q7-0926 |
Urinary bladder
|
PAXgene |
1
|
7 pieces, ~7x3.5mm. Urothelium remarkably well-preserved, ~2-3% of thickness
|
Acceptable
|
|
GTEX-S4Q7
|
21-40
|
Male
|
GTEX-S4Q7-1026 |
Prostate
|
PAXgene |
1
|
2 aliquots, ~10x8mm. Glandular epithelium remarkably well-preserved, prominent glandular hyperplasia
|
Acceptable
|
|
GTEX-S4Q7
|
21-40
|
Male
|
GTEX-S4Q7-1226 |
Testis
|
PAXgene |
1
|
2 aliquots, ~12x7mm. Spermatogenesis appears markedly reduced
|
Acceptable
|
|
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, ~6x2mm; mucosa moderately well-preserved, ~10-15% of thickness
|
Acceptable
|
|
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0926 |
Urinary bladder
|
PAXgene |
1
|
6 pieces, ~6x4 mm; urothelium unusually well-preserved, ~5% of thickness
|
Acceptable
|
|
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1026 |
Ovary
|
PAXgene |
1
|
2 aliquots, ~9x6.5mm. Post-menopausal atrophic changes
|
Acceptable
|
|
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1126 |
Fallopian tube
|
PAXgene |
1
|
2 aliquots, artery, not fallopian tube. Unknown provenance.
|
Unacceptable
|
|
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1226 |
Uterus
|
PAXgene |
1
|
2 aliquots ~8x7mm. One has remote placental implantation site scarring, encircled. No endometrial glandular or stromal tissue is evident
|
Acceptable
|
|
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1326 |
Vagina
|
PAXgene |
1
|
6 pieces, 7x2.5mm. Squamous mucosa is ~10% of thickness
|
Acceptable
|
|
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1426 |
Cervix - ectocervix
|
PAXgene |
1
|
4 aliquots, ~6x4mm. Squamous mucosa present on 2 of 4 pieces, ~5% of thickness. No dysplasia evident
|
Acceptable
|
|
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1526 |
Cervix - endocervix
|
PAXgene |
1
|
4 aliquots, ~7x4mm. All stroma, no endocervical glands noted.
|
Acceptable
|
|
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-0126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces 10x6 & 8x7 mm; cortex
|
Acceptable
|
|
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-0226 |
Spleen
|
PAXgene |
1
|
2 pieces 9x8 & 9x7 mm; mild congestion
|
Acceptable
|
|
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-0526 |
Liver
|
PAXgene |
1
|
2 pieces 11x8 & 10x8 mm; moderate macrovesicular steatosis; mild microvesicular steatosis
|
Acceptable
|
|
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-0626 |
Aorta
|
PAXgene |
1
|
6 pieces up to 9x1.7 mm; scattered medial calcification
|
Acceptable
|
|
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 10x3.8 mm; all muscle no mucosa; Relabel as muscularis
|
Acceptable
|
|
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 6x2 mm; all mucosa; relabel as mucosa. epithelium partially sloughed
|
Acceptable
|
|
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-0926 |
Coronary artery
|
PAXgene |
1
|
pieces 4x2 mm arteries with a 3x2 mm adherent adipose attachment; eccentric plaque
|
Acceptable
|
|
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-1026 |
Heart
|
PAXgene |
1
|
2 pieces 10x9 & 8x8 mm;
|
Acceptable
|
|
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-1126 |
Pancreas
|
PAXgene |
1
|
2 pieces 12x6 & 10x7; two cysts up to 2 mm. patchy fibrosis; interna; and external adipose ~40%.
|
Acceptable
|
|
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-1426 |
Prostate
|
PAXgene |
1
|
2 pieces 12x11 & 10x9 mm; nodular hyperplasia
|
Acceptable
|
|
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 11x4 mm;
|
Acceptable
|
|
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-1626 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 8x3 mm; 3 pieces have subcutaneous adipose tissue up to 1.8 mm; should have been trimmed
|
Acceptable
|
|
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-1826 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces 12x8 & 9x7 mm; ~25% internal and external adipose
|
Acceptable
|
|
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-1926 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces ~5x3 mm; clean, no expernal adipose; ~10% internal adipose
|
Acceptable
|
|