GTEX-1RAZQ
|
21-40
|
Male
|
GTEX-1RAZQ-1926 |
Stomach
|
PAXgene |
1
|
6 pieces, gastric mucosa is ~1mm, 25-30% thickness, reasonably well -preserved
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZQ
|
21-40
|
Male
|
GTEX-1RAZQ-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZQ
|
21-40
|
Male
|
GTEX-1RAZQ-2126 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, target mucosa with moderately advanced autolysis, up to ~0.4mm, ~10-20% thickness
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZQ
|
21-40
|
Male
|
GTEX-1RAZQ-2226 |
Ileum
|
PAXgene |
1
|
6 pieces, target lymphoid aggregates ~40% of tissue, rep delineated
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces; well trimmed; dermal fat 10%; several hair follicles
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; 1 with 5% other with 20% fibrous content
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; 1 with 5% internal fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces: well trimmed
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; focally calcified intima with minimal plaque; well trimmed
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-0626 |
Aorta
|
PAXgene |
0
|
6 pieces; no plaques, no lesions; well trimmed
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-0726 |
Lung
|
PAXgene |
1
|
2 pieces; area of subpleural fibrosis at edge of 1 piece (10% of area) [arrowed]; numerous alveolar macrophages
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-0826 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; 2 glands, 1 with 30% lip at edge [marked]
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-0926 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; fibrofatty tissue without obvious mammary ducts
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-1026 |
Omentum
|
PAXgene |
0
|
2 pieces; fatty tissue with <5% stroma
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-1126 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; well dissected thyroid with <5% stroma
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-1226 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces; moderately hyperplastic squamous epithelium with chronic inflammation in lamina propria and squamous metaplasia of glandular ducts [circled]; a few submucosal glands [arrowed]
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-1326 |
Esophagus - muscularis
|
PAXgene |
0
|
4 pieces; well dissected muscularis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-1426 |
Gastroesophageal junction
|
PAXgene |
0
|
5 pieces; 2 have 10 & 20% stromal contents
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-1526 |
Stomach
|
PAXgene |
2
|
6 pieces; mucosa ranges from slight to moderate autolysis; muscularis has slight autolysis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-1626 |
Spleen
|
PAXgene |
1
|
2 pieces; moderately congested
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-1726 |
Pancreas
|
PAXgene |
1
|
2 pieces; increased number of islets [arrowed]; foci of fibrosis and ductal proliferation [circled] c/w chronic 2inflammation; sample may be near tail of pancreas
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-1826 |
Ileum
|
PAXgene |
1
|
5 pieces; abundant lymphoid nodules in 4 pieces [circled]; well dissected
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-1926 |
Colon, transverse
|
PAXgene |
1
|
5 pieces; well dissected full thickness
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-2026 |
Colon, sigmoid
|
PAXgene |
0
|
6 pieces; muscularis; abundant adjacent fat on 2
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-2126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; well trimmed; a few hair follicles; 5% dermal fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |