GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-0326 |
Aorta
|
PAXgene |
1
|
6 pieces, ~9x2mm. Several with layer of atherosis, up to 0.5mm in areas
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-0426 |
Coronary artery
|
PAXgene |
1
|
4 pieces ~2.5mm d. Several with ~0.5mm discontinuous adherent fat; several with ~20% atherosclerotic narrowing
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-0526 |
Heart
|
PAXgene |
1
|
2 aliquots, ~10x5mm. Mild ischemic changes, focal contraction banding noted
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-0626 |
Lung
|
PAXgene |
1
|
2 aliquots, ~9x6mm. Minimal congestion/edema
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-0726 |
Pancreas
|
PAXgene |
1
|
2 aliquots, ~9x6mm. Both with ~50% parenchyma, rest is intermingled/peripheral fat. Well preserved.
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-1026 |
Thyroid gland
|
PAXgene |
1
|
2 aliquots, ~1.5x7.5mm
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-1126 |
Stomach
|
PAXgene |
1
|
6 pieces, ~7.5x3mm. Mucosa up to 700microns thick, ~20-25% of thickness. Superficial 10% mucosa badly autolyzed; deeper is excellent.
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-1226 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, ~7x2.5mm. Mucosa reasonably well-preserved, ~25-30% of thickness
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-1326 |
Urinary bladder
|
PAXgene |
1
|
6 pieces, ~9x2mm. Urothelium better preserved than usual, ~3-4% of thickness
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-2126 |
Testis
|
PAXgene |
1
|
2 aliquots, ~10x7mm. Reduced spermatogeneisis
|
Acceptable
|
|
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-0326 |
Coronary artery
|
PAXgene |
1
|
2 aliquots, ~2mm d. Both with subtotally occlusive calcified atherosclerosis, one with adherent ~2.5x1mm
|
Acceptable
|
|
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-0426 |
Heart
|
PAXgene |
1
|
2 aliquots, ~8x8mm. Patchy confluient healed infarcts up to ~3.5mm d. Ischemic changes diffusely
|
Acceptable
|
|
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-0626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 aliquots ~7x7mm. All adipose tissue, no ductal elements noted
|
Acceptable
|
|
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-0726 |
Aorta
|
PAXgene |
1
|
6 pieces ~7x1.5mm
|
Acceptable
|
|
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-1426 |
Nerve - tibial
|
PAXgene |
1
|
2 aliquots, ~4.5x2.5. Adherent nubbine of fat, ~2x0.5mm on one
|
Acceptable
|
|
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-1526 |
Artery - tibial
|
PAXgene |
1
|
2 aliquots, ~3mm d. Subtoally occlusive calcified atherosclerosis; also Monckeberg's medial sclerosis
|
Acceptable
|
|
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-2026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, singlue minute fragment of squamou mucosa; rest is fibrous tissue
|
Unacceptable
|
|
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-2226 |
Skin, leg
|
PAXgene |
1
|
6 pieces, ~7x2.5mm. Squamous epithelium is ~1-2% of thickness
|
Acceptable
|
|
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-2326 |
Adipose tissue
|
PAXgene |
1
|
2 aliquots, ~7x5mm. NOTE: ~50% of one is vessel and fibrous tissue
|
Acceptable
|
|
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-2426 |
Muscle, skeletal
|
PAXgene |
1
|
2 aliquots, ~9x7mm. Moderte interstitial fat
|
Acceptable
|
|
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-2726 |
Pituitary gland
|
PAXgene |
1
|
4 aliquots, ~6x4mm of cortex. May be used for GTEx once labels corrected--switch with pituitary aliquot
|
Acceptable
|
|
GTEX-RVPV
|
61-70
|
Male
|
GTEX-RVPV-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 11x5 mm;
|
Acceptable
|
|
GTEX-RVPV
|
61-70
|
Male
|
GTEX-RVPV-0226 |
Artery - tibial
|
PAXgene |
1
|
2 pieces ~ 4x2 mm; ~40% peripheral adipose
|
Acceptable
|
|
GTEX-RVPV
|
61-70
|
Male
|
GTEX-RVPV-0426 |
Aorta
|
PAXgene |
1
|
6 pieces up to 10x2 mm
|
Acceptable
|
|
GTEX-RVPV
|
61-70
|
Male
|
GTEX-RVPV-0526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 6x3 mm; very good mucosa preservation; moderate venous congestion
|
Acceptable
|
|