GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-0426 |
Omentum
|
PAXgene |
1
|
2 pieces; 5 & 10% fibrous content
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-0526 |
Gastroesophageal junction
|
PAXgene |
0
|
6 pieces; 10% fibrofatty stromal content
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-0626 |
Stomach
|
PAXgene |
1
|
6 pieces; muscularis only, no mucosa
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-0726 |
Ileum
|
PAXgene |
1
|
4 pieces; only 1 piece has lymphoid nodules; LCM
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-0826 |
Colon, sigmoid
|
PAXgene |
0
|
6 pieces; well dissected muscularis propria
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-0926 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces; esophagus mucosa, not muscularis; all have prominent submucosal glands occupying 10%
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-1026 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness with focal excess of fatty adventitia
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-1126 |
Prostate
|
PAXgene |
0
|
2 pieces; seminal vesicle not prostate sampled
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-1226 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; several hair follicles in each piece; well trimmed; <10% dermal fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-1326 |
Testis
|
PAXgene |
1
|
2 pieces; active spermatogenesis; no lesions
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-1426 |
Skin, leg
|
PAXgene |
0
|
6 pieces; 10% dermal fat with appendages; well trimmed
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-1526 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; sweat glands and ducts embedded in fibrous stroma comprise 10%
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-1626 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces; well dissected; <10% fat content
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-1726 |
Artery - tibial
|
PAXgene |
0
|
2 pieces; well dissected; no lesions
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-1826 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; fibro fatty tissue without obvious mammary ducts
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-1926 |
Muscle, skeletal
|
PAXgene |
0
|
3 pieces; <5% internal fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-2026 |
Minor salivary glands
|
PAXgene |
0
|
1 piece; very well dissected gland
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, prominent Hashimoto thyroiditis with regressive changes; rep lymphoid aggregates delineated
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-0326 |
Aorta
|
PAXgene |
0
|
6 pieces, atherosis up to ~0.3mm
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-0426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, target muscularis; no mucosa. Switch with -0525
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-0526 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces target squamous mucosa is partly sloughing, ~0.2mm, ~5-10% thickness. Chronic lymphoid aggregates in lamina propria. Switch with -0425
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-0626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis. Adherent rim of serosa up to ~1.5mm
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-0726 |
Stomach
|
PAXgene |
2
|
6 pieces, target mucosa partly sloughed, up to ~0.5mm, moderately autolyzed
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-0826 |
Omentum
|
PAXgene |
0
|
2 pieces, trace mesothelium/fascia
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |