GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-1126 |
Coronary artery
|
PAXgene |
1
|
1 piece, no coronary artery; probably sinus with myocardium/pericardial fat
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-1226 |
Heart
|
PAXgene |
1
|
2 pieces, pronounced interstitial fibrosis/chronic ischemic changes
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-1326 |
Aorta
|
PAXgene |
1
|
6 pieces, calcifying (rep encircled) atherosis up to ~0.8mm
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-1426 |
Liver
|
PAXgene |
1
|
2 pieces, moderate macrovesicular steatosis and bridging fibrosis approaching early cirrhosis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-1526 |
Spleen
|
PAXgene |
2
|
2 pieces, moderate congestion
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-1626 |
Omentum
|
PAXgene |
1
|
2 pieces, fragmented, ~10% fascia/mesothelial hyperplasia
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-1726 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present in 3; advanced autolysis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-1826 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderate-advanced saponification; islets barely visible, advanced degradation
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-1926 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, cortex, advanced autolysis; ~15-20% adherent fat, delineated
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; ~10% 'contaminant' squamous mucosa, rep delineated
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2126 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa up to ~1mm, 50-70% thickness, moderately-advanced autolysis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2226 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.4mm, ~15-20% thickness
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2326 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces; confirmed target muscularis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2426 |
Ileum
|
PAXgene |
3
|
6 pieces, autolyzed mucosa, no target lymphoid aggregates
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2526 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, trace dermal fat, squamous epithelium is 30-45 microns
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.4mm, ~20-25% thickness. Glandular elements sloughed, lamina propria only
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, target muscularis is ~50-605 of tissue, rep delineated.
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2826 |
Testis
|
PAXgene |
2
|
2 pieces, moderate tubular autolysis; spermatogenesis is present, appears reduced
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2926 |
Prostate
|
PAXgene |
2
|
2 pieces, advanced glandular autolysis; by pattern and yellow pigment in autolyzed mucosa (rep ensquared) this is seminal vesicle, not prostate
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-3026 |
Pituitary gland
|
PAXgene |
2
|
1 piece (fragmented), adenohypophysis with ~4x1.5mm neurohypophysis, delineated, ~20% of specimen
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-3126 |
Brain - cortex
|
PAXgene |
1
|
5 pieces, fragmented, no abnormalities
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-3226 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces cerebellum (delineated), 2 pieces cortex
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP29
|
51-60
|
Male
|
GTEX-1QP29-0126 |
Spleen
|
PAXgene |
1
|
2 pieces; congestion
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP29
|
51-60
|
Male
|
GTEX-1QP29-0226 |
Aorta
|
PAXgene |
1
|
6 pieces; atherosis (rep arrowed)
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1QP29
|
51-60
|
Male
|
GTEX-1QP29-0326 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; cortex and medulla and prominent vein (arrow); ~1mm rim of fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |