GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-1826 |
Artery - tibial
|
PAXgene |
1
|
2 3x1mm aliquots, surrounded in to or part by up to 2mm rim of fat, small vessels & connective tissue
|
Unacceptable
|
|
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-2026 |
Coronary artery
|
PAXgene |
1
|
2 ~2mm artery. Dense calcification. Note: aliquots surrounded by up to2.5-5mm layer of fat (60% of total aliquot)
|
Unacceptable
|
|
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-2126 |
Heart
|
PAXgene |
1
|
2 ~9x7mm aliquots, patchy ischemic changes (contraction bands) noted. 8.5x1.5mm layer of fat along edge of one aliquot
|
Acceptable
|
|
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-2826 |
Testis
|
PAXgene |
1
|
2 `9.5x6.5mm aliquots. Markedly reduced spermatogenesis
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-0226 |
Spleen
|
PAXgene |
1
|
2 pieces 9x6 & 9x7 mm
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-0326 |
Pancreas
|
PAXgene |
1
|
2 pieces 14x7 & 8x7 mm; islets up to 334 um. <5% peripheral fat
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-0426 |
Coronary artery
|
PAXgene |
1
|
2 ~3.3 mm; no sclerosis; slight histologic tears; ~15% peripheral adipose
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-0526 |
Heart
|
PAXgene |
1
|
2 pieces 8x7 & 7x7 mm; slight histologic tears
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-0626 |
Aorta
|
PAXgene |
1
|
6 pieces up to 10x1.5 mm;
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-0726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces 11x8 & 9x7 mm; slightly nodular; peripheral cassette marks
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-0826 |
Lung
|
PAXgene |
1
|
2 pieces 11.6x10 & 9x8 mm; no inflammation
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 7x3 mm; 1 piece has glandular and squamous mucosa and squamous hyperplasia (probably reflux changes); scattered tissue tears (histologic)
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-1126 |
Stomach
|
PAXgene |
1
|
6 pieces up to 10x4.7 mm; good mucosal preservation, up to 1mm thick
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-1226 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 6.5x3 mm; good mucosal preservation; moderate histologic tissue tears
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-1426 |
Prostate
|
PAXgene |
1
|
2 pieces 11x8 & 9x7 mm; focally nodular; one surface has prostatic urethra; one large peripheral defect 4x1.5 mm
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-1526 |
Testis
|
PAXgene |
1
|
2 pieces 10x8 & 7x6 mm. spermatogenesis
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-1626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces 15.7x9 & 11x10 mm; central defects probable fixation effects; no mammary ducts, only adipose and a few fibrous strands
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-1726 |
Adipose tissue
|
PAXgene |
1
|
2 pieces 14.6x11 &9x6 mm; central (probable fixation) defects
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-1826 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 8.6x2.8 mm
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-1926 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces 11x6 & 9x8 mm; larger piece has 3x2.4 mm central (fixation?) defect and moderate tissue (histologic) fragmentation
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-2026 |
Artery - tibial
|
PAXgene |
1
|
2 arteries 3.2&2.7 mm; folded, polypoid intima
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-2126 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces 2.4x1.3 & 2.6x2 mm; 1 has 30% adipose and 40% edematous stroma; other has <10% adipose
|
Acceptable
|
|
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-0226 |
Pancreas
|
PAXgene |
1
|
2 ~7x6mm aliquots, good clean specimens with no peripancreatic fat; ~5% interstitial fat/fibrous tissue
|
Acceptable
|
|
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-0626 |
Stomach
|
PAXgene |
1
|
6 ~6x4mm pieces; mucosa well-preserved, ~25% of thickness in most pieces
|
Acceptable
|
|
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-0826 |
Colon, transverse
|
PAXgene |
1
|
6 ~7.5x3mm pieces; mucosa well-preserved, ~15-40% of thickness
|
Acceptable
|
|