GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-1326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces of adipose tissue without mammary elements; large central defects in 15x12 & 12x12 mm aliquots; probably poorly fixed
|
Unacceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-1426 |
Skin, leg
|
PAXgene |
1
|
6 pieces, up to ~5 x 3.8 mm; epidermis ~90um
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-1526 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 13x9 & 13x8 mm; large central defects, probably poorly fixed in these large aliquots
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-1626 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, 10x8.6 & 9.4x7.9 mm
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-1726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, 2.5x4 & 2.5x3 mm, minimal peripheral adipose
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-1826 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, 1.5 – 2 mm diameter; no plaques; no extraneous adipose tissue
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-2026 |
Liver
|
PAXgene |
1
|
2 pieces ~9x8mm; central pallor; no fibrosis or inflammation
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-0126 |
Adrenal glands
|
PAXgene |
1
|
2 ~7.5x2mm aliquots, cortex only; one with 2.5x 1.5 mm nodule of fat on one end.
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-0326 |
Coronary artery
|
PAXgene |
1
|
2 ~3x2mm aliquots, 30% occlusive calcified atherosis in one
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-0426 |
Aorta
|
PAXgene |
1
|
6 ~8x1.5mm pieces, mild patchy atherosis
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-0526 |
Heart
|
PAXgene |
1
|
2 ~9x8mm aliquots, minimal ischemic changes
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-0626 |
Pancreas
|
PAXgene |
1
|
2 ~14x8mm aliquots, relatively clean, 5x2mm nodule of fat on end of one aliquot
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-0726 |
Thyroid gland
|
PAXgene |
1
|
2 ~9x7mm aliquots, patchy areas of regression/fibrosis
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-0826 |
Stomach
|
PAXgene |
1
|
6 ~8x3mm pieces; mucosa generally well preserved, ~20-25% of thickness
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 ~7x2mm pieces with squamous mucosa ~10% of thickness
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 ~8x2.5mm pieces
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1126 |
Colon, transverse
|
PAXgene |
1
|
6 ~8.5x3mm pieces; mucosa is generally well-preserved, ~ 10% of thickness
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1226 |
Urinary bladder
|
PAXgene |
1
|
6 ~8.5x4mm pieces; Urothelium variably sloughed, <1% of thickness
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1326 |
Prostate
|
PAXgene |
1
|
2 ~11x8.5mm aliquots. Diffuse cystic glandular atrophy and patchy chronic prostatits
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1426 |
Testis
|
PAXgene |
1
|
2 ~11x9mm aliquots. Spermatogenesis is present but appears reduced
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1526 |
Adipose tissue
|
PAXgene |
1
|
2 ~11x8m aliquots
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1626 |
Skin, leg
|
PAXgene |
1
|
6 ~6.5x2.5mm pieces; squamous epithelium is ~1-2% of thickness
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1726 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~11x6mm aliquots, <5-10% interstitial fat
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1826 |
Nerve - tibial
|
PAXgene |
1
|
2 ~6x4mm aliquots, ~10% interstitial fat
|
Acceptable
|
|
GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1926 |
Artery - tibial
|
PAXgene |
1
|
2 ~2x1mm aliquots, substantial rims of fat/fibrous tissue around both (up to 1-2mm).
Focal Monckeberg’s medial sclerosis noted
|
Acceptable
|
|