GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 8.6x3 mm; all have mucosa not muscularis propria; re-label as Esophagus- mucosa; surface desquamation and separation of epithelium from lamina propria; possible chemical exposure
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1526 |
Liver
|
PAXgene |
1
|
2 pieces, 9x8 & 10x6mm; severe vascular congestion mainly centrolobular
|
Acceptable
|
|
GTEX-QEG5
|
21-40
|
Male
|
GTEX-QEG5-1626 |
Spleen
|
PAXgene |
1
|
2 pieces 8x7 & 7x5 mm; heavily congested
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0226 |
Skin, leg
|
PAXgene |
1
|
6 ~8x3mm pieces. Squamous epithelium is ~1-2% of thickness. ~1mm layer of subcutaneous fat present in 5 pieces
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0326 |
Adipose tissue
|
PAXgene |
1
|
2 ~9x9mm aliquots
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 ~6x5mm aliquots, ~10% interstitial/peripheral adipose tissue
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0526 |
Artery - tibial
|
PAXgene |
1
|
2 ~3mm d aliquots, clean specimens
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0626 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~11x6mm aliquot; <5% interstitial adipose tissue, clean specimens
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0726 |
Thyroid gland
|
PAXgene |
1
|
2 ~9.5x5.5mm aliquots. Adenomatoid nodules with regressive changes
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-0926 |
Heart
|
PAXgene |
1
|
2 9x8mm aliquots, patchy interstitial fibrosis
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1026 |
Coronary artery
|
PAXgene |
1
|
2 ~3.5x2.5mm aliquots, one with partial ~0.5mm rim of fat. Minimal/no atherosclerotic deposition
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1126 |
Aorta
|
PAXgene |
1
|
6 ~9x1.5mm pieces. Minimal atherosis
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1226 |
Liver
|
PAXgene |
1
|
2 ~7.5x7.5mm aliquots, diffuse macrovesicular steatosis and chronic hepatitis with bridging fibrosis
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1326 |
Pancreas
|
PAXgene |
1
|
2 ~7x6.5mm aliquots, remarkably well preserved no saponification. One aliquot with 5x0.5mm adherent fat; otherwise clean specimens
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 ~6x1mm pieces; squamous mucosa is 15-40% of thickness
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 ~7x4mm pieces
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-2026 |
Prostate
|
PAXgene |
1
|
2 ~9x6.5mm aliquots, patchy glandular hyperplasia and atrophy
|
Acceptable
|
|
GTEX-QEL4
|
51-60
|
Male
|
GTEX-QEL4-2126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 ~9.5x6.5mm aliquots. Ductal elements visible in both
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0126 |
Spleen
|
PAXgene |
1
|
2 pieces ~10x8mm; slight congestion
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0226 |
Pancreas
|
PAXgene |
1
|
2 pieces, ~9x7 & 8x8 mm; focal atrophic lobule; <10% adipose; islets ~150um appear normal
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0326 |
Coronary artery
|
PAXgene |
1
|
2 pieces, ~2.5 mm arteries with focal eccentric plaques; ~20% peripheral adipose tissue
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0426 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 11x3 mm; no plaques; 2 pieces have about 40% periaortic adipose tissue
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0526 |
Heart
|
PAXgene |
1
|
2 pieces, 11x7 & 9x8.7; few contraction bands
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 8.5x4.9 mm; good muscle layer
|
Acceptable
|
|
GTEX-QESD
|
21-40
|
Male
|
GTEX-QESD-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 5.9x3.8 mm; good squamous mucosa
|
Acceptable
|
|