GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-1426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa is main site of mild to moderate autolysis; muscle is intact
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-1526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well dissected except for several foci of mucosa on 2 of 6 pieces, occupying 5%; arrowed
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-1626 |
Testis
|
PAXgene |
1
|
2 pieces, 1 fragmented; active spermatogenesis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-1726 |
Prostate
|
PAXgene |
1
|
2 pieces; well preserved; no lesions
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-1826 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; several hair follicles; well trimmed; 1% dermal fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0126 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, well trimmed skeletal muscle
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0226 |
Skin, leg
|
PAXgene |
1
|
6 pieces; 10 to 25% internal (periadnexal) fat; trace of external fat (outlined); ~47 micron thick epidermis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature adipose tissue and septal fibrous component (arrows)
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0426 |
Prostate
|
PAXgene |
2
|
2 pieces; glandular component moderately autolyzed with sloughed lining epithelium; fibromuscular stroma; focal calcifications (arrows);
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0526 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis present
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0626 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; congested adventitia measures up to 0.88mm
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 10% and 15% external fat (outlined) and ~10% internal fat (arrow)
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; stratified squamous epithelium up to 0.25mm; submucosal seromucous glands (outlined); small aggregates of lymphocytes (arrows)
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; target muscularis and adherent serosa
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis with adherent serosa
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-1126 |
Pancreas
|
PAXgene |
3
|
2 pieces; severely autolyzed glandular part and septal fat; not visible Langerhans islets
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-1226 |
Spleen
|
PAXgene |
1
|
2 pieces; mild to moderated autolysis and congestion
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-1326 |
Liver
|
PAXgene |
1
|
2 pieces; mild to moderate autolysis and marked central fatty degeneration
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-1426 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; moderate to severe autolysis; ~20% external fat (outlined)
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-1526 |
Aorta
|
PAXgene |
1
|
6 pieces; early sclerotic plaque (rep arrow); congested adventitia
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-1626 |
Stomach
|
PAXgene |
3
|
6 pieces; severely autolyzed gastric mucosa; preserved small area of mucosa (arrow) and preserved muscularis; congestion
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-1726 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; mild to moderate autolysis of renal cortex; congestion
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-1826 |
Lung
|
PAXgene |
1
|
2 pieces; congestion; anthracosis (arrows); enlarged pulmonary alveoli; focally collapsed alveolar spaces; skeletal muscle focus, possible floater (outlined)
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-1926 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa but residual target lymphoid aggregates (arrows) are over 50% of tissue
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1PIIG
|
21-40
|
Male
|
GTEX-1PIIG-2026 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; trace adherent fat (outlined) and skeletal muscle(arrow); scattered small lymphocytic aggregates
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |