GTEX-Q2AH
|
21-40
|
Male
|
GTEX-Q2AH-1626 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 7.7x2.6 mm; several sectioning lines and tissue tears
|
Acceptable
|
 |
GTEX-Q2AH
|
21-40
|
Male
|
GTEX-Q2AH-1726 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 14x10 & 16x8mm; largest with central hollow defect; 2 large veins in one aliquot
|
Acceptable
|
 |
GTEX-Q2AH
|
21-40
|
Male
|
GTEX-Q2AH-1826 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces , 10x6 & 9x6mm; large tissue tears in one piece
|
Acceptable
|
 |
GTEX-Q2AH
|
21-40
|
Male
|
GTEX-Q2AH-1926 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces ~5x2.6mm; minor fat tissue
|
Acceptable
|
 |
GTEX-Q2AH
|
21-40
|
Male
|
GTEX-Q2AH-2026 |
Artery - tibial
|
PAXgene |
1
|
2 pieces with arteries, 3x1.6mm; veins, 1 large; minor fat component
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-0126 |
Spleen
|
PAXgene |
1
|
2 pieces ~11x8 mm; low lymphoid content
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-0226 |
Adrenal glands
|
PAXgene |
1
|
2 pieces ~9x1 mm; good cortical morphology
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-0326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces 11x7 & 10x8mm; 1.3mm circular defect corresponds to cassette’s center-point
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-0426 |
Pancreas
|
PAXgene |
1
|
2 pieces 12x8 & 7x7 mm; ~20% fat in each (included amongst the parenchyma, not outside)
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-0526 |
Lung
|
PAXgene |
1
|
2 pieces ~9x7 mm; extensive bronchopneumonia
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-0626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 7x2.5 mm; hyperplastic mucosa up to 0.7mm;
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-0726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces up to 7x3 mm; 3 have squamous mucosa; 3 have squamous and glandular (cardiac) mucosa; none have muscularis
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-0826 |
Stomach
|
PAXgene |
1
|
6 pieces up to 8x4.5 mm; good mucosa; many mucosal tissue tears in every piece, doesn’t appear to be poor fixation
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-0926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 7.5x4 mm; good mucosa
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-1026 |
Urinary bladder
|
PAXgene |
1
|
6 pieces up to 7x5 mm; epithelial hyperplasia
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-1126 |
Prostate
|
PAXgene |
1
|
2 pieces 9x6 & 7x7 mm; hyperplastic
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-1226 |
Testis
|
PAXgene |
1
|
2 pieces up to 10x6 mm; spermatogenesis
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-1326 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 8x3 mm; moderate tissue tears
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-1426 |
Adipose tissue
|
PAXgene |
1
|
2 pieces 10x8 & 13x10 with large central hollow fixation defects
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-1526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, 10x6 & 14x6 mm; minimal fat and stroma
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-1626 |
Nerve - tibial
|
PAXgene |
1
|
2, 2mm pieces each with 1 mm nerves and 50-60% surrounding fat
|
Acceptable
|
 |
GTEX-Q2AI
|
41-50
|
Male
|
GTEX-Q2AI-1726 |
Artery - tibial
|
PAXgene |
1
|
2 pieces each with 1mm artery and 0.8 mm vein plus ~30% of each 2.5 mm aliquot with surrounding fat and stroma
|
Acceptable
|
 |
GTEX-Q734
|
41-50
|
Female
|
GTEX-Q734-0126 |
Adrenal glands
|
PAXgene |
1
|
2 ~8.5x6mm aliquots. Cortex only, no visible medulla
|
Acceptable
|
 |
GTEX-Q734
|
41-50
|
Female
|
GTEX-Q734-0326 |
Liver
|
PAXgene |
1
|
2 ~7.5x7.5mm aliquots. Severe bridging fibrosis/early cirrhosis with steatotis and chronic hepatitis.
|
Acceptable
|
 |
GTEX-Q734
|
41-50
|
Female
|
GTEX-Q734-0426 |
Pancreas
|
PAXgene |
1
|
2 ~8.5x8mm aliquots, well preserved, clean with minimal fat
|
Acceptable
|
 |