GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, all muscularis, good specimens
|
Acceptable
|
|
GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-1526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, all muscularis
|
Acceptable
|
|
GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~0.5mm thick, ~20% total; a few submucosal mucus glands noted, delineated
|
Acceptable
|
|
GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-1726 |
Stomach
|
PAXgene |
1
|
6 pieces, well preserved mucoa; patchy acute/active gastritis with leukocytes in deep mucosa and submucosa, rep foci delineated. Mucosa up to ~0.5-0.7mm thick, ~20% total
|
Acceptable
|
|
GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-1826 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, fibroadipose tissue, no ductal elements noted
|
Acceptable
|
|
GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-1926 |
Ileum
|
PAXgene |
1
|
6 pieces, well preserved, good lymphoid aggregates, ~40% total tisssue; rep foci delineated
|
Acceptable
|
|
GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, all muscularis, trace 'contaminant' mucosa; good specimens
|
Acceptable
|
|
GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-2126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, well preserved mucosa up to ~40-50% thickness
|
Acceptable
|
|
GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-2226 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces,j ~40% glandular tissue (rep foci delineated), rest is squamous mucosa/muscle/stroma
|
Acceptable
|
|
GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-2326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~10-20% fibrovascular/fascial tissue, rep. delineated
|
Acceptable
|
|
GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-2426 |
Skin, leg
|
PAXgene |
0
|
6 pieces, minimal dermal fat; squamous epithelium is 35-50 microns
|
Acceptable
|
|
GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-2526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, minimal interstitial fat
|
Acceptable
|
|
GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-2626 |
Nerve - tibial
|
PAXgene |
0
|
4 pieces, clean specimens, no adherent fat
|
Acceptable
|
|
GTEX-12BJ1
|
61-70
|
Male
|
GTEX-12BJ1-2726 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, rim of adherent fibrous tissue, up to ~1mm thick, delineated, generally good specimens
|
Acceptable
|
|
GTEX-12C56
|
21-40
|
Male
|
GTEX-12C56-0126 |
Lung
|
PAXgene |
0
|
2 pieces, atelectasis, alveolar hemorrhage
|
Acceptable
|
|
GTEX-12C56
|
21-40
|
Male
|
GTEX-12C56-0226 |
Aorta
|
PAXgene |
0
|
6 pieces, attached adventitia, no lesions
|
Acceptable
|
|
GTEX-12C56
|
21-40
|
Male
|
GTEX-12C56-0326 |
Thyroid gland
|
PAXgene |
0
|
2 pieces, focal cystic change
|
Acceptable
|
|
GTEX-12C56
|
21-40
|
Male
|
GTEX-12C56-0426 |
Gastroesophageal junction
|
PAXgene |
0
|
6 pieces, predominantly well trimmed, but with two small strips of squamous mucosa
|
Acceptable
|
|
GTEX-12C56
|
21-40
|
Male
|
GTEX-12C56-0526 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa, submucosa, and muscularis, mild acute gastritis, predominantly autolysis 1, focally 2
|
Acceptable
|
|
GTEX-12C56
|
21-40
|
Male
|
GTEX-12C56-0626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa and muscularis
|
Acceptable
|
|
GTEX-12C56
|
21-40
|
Male
|
GTEX-12C56-0726 |
Mammary tissue (breast)
|
PAXgene |
0
|
3 pieces, 50% fat/50% fibrous, small attachment of skeletal muscle
|
Acceptable
|
|
GTEX-12C56
|
21-40
|
Male
|
GTEX-12C56-0826 |
Omentum
|
PAXgene |
1
|
2 pieces, 10% is fibrous/vascular
|
Acceptable
|
|
GTEX-12C56
|
21-40
|
Male
|
GTEX-12C56-0926 |
Ileum
|
PAXgene |
2
|
6 pieces, moderately autolyzed mucosa with abundant lymphoid tissue, muscularis (not target) also present in every piece
|
Unacceptable
|
|
GTEX-12C56
|
21-40
|
Male
|
GTEX-12C56-1026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, 3 of 6 include mucosa
|
Unacceptable
|
|
GTEX-12C56
|
21-40
|
Male
|
GTEX-12C56-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, well trimmed
|
Acceptable
|
|