GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-2226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well dissected muscle, virtually free of fat
|
Acceptable
|
|
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-2326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; ducts in fibroadipose tissue
|
Acceptable
|
|
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa completely autolyzed; muscularis intact and mildly autolyzed
|
Acceptable
|
|
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-2526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected muscle with limited amount of extraneous fat
|
Acceptable
|
|
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-2626 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces; mucosa largely sloughed; several submucosal glands annotated for possible LCM study
|
Acceptable
|
|
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-2726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; well dissected muscle with limited amount of extraneous fat
|
Acceptable
|
|
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-2826 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa completely autolyzed, no muscularis propria present
|
Unacceptable
|
|
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-2926 |
Pituitary gland
|
PAXgene |
2
|
1 piece; well dissected anterior portion
|
Acceptable
|
|
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-3026 |
Brain - cortex
|
PAXgene |
1
|
2 pieces; small amount of meninges present
|
Acceptable
|
|
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-3126 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-0126 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, multinodular goiter, colloid nodules up to ~5mm
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-0226 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-0326 |
Heart
|
PAXgene |
1
|
2 pieces, diffuse myocarditis, mild-moderate, focal myocyte damage noted; findings may reflect history of recent cardicac transplant 3 d prior to demise (ie rejection vs reactive inflammation)
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-0426 |
Lung
|
PAXgene |
1
|
2 pieces chronic interstitial pneumonitis
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-0526 |
Aorta
|
PAXgene |
1
|
6 pieces, mild atherosis (~0.2mm); adherent serosa up to ~0.5mm
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-0626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, trace residual squamous mucosa (delineated) and mucous glands (encircled)
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-0726 |
Stomach
|
PAXgene |
1
|
6 pieces, exceptionally well-preserved mucosa, up to ~1mm, ~30-40% thickness
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-0826 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa score ranges from 1 to mainly '2' as noted; ~15% total thickness, ~0.5mm
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces. Squamous mucosa is 5-10% thickness. Submucosa mucous glands present, encircled (rep)
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, all muscularis
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-1126 |
Omentum
|
PAXgene |
1
|
2 pieces, ~10% vascular/mesothelial tissue, rep. delineated
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-1226 |
Ileum
|
PAXgene |
1
|
6 pieces, exceptionally well-preserved; lymphoid aggregates ~10-15% of total tissue, delineated
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-1326 |
Liver
|
PAXgene |
1
|
2 pieces, diffuse microvesicular steatosis, mild-moderate fibrosis
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ~90% muscularis; 'contaminant mucosa up to ~10%
|
Acceptable
|
|
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-1526 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces, ~70% gland parenchyma (delineated) rest stroma/connective tissue. Good specimens
|
Acceptable
|
|