GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1126 |
Fallopian tube
|
PAXgene |
1
|
2 pieces fibrovascular tissue, no tube is present
|
Unacceptable
|
|
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces of fibroadipose tissue, unknown provenance.
|
Unacceptable
|
|
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1526 |
Skin, leg
|
PAXgene |
1
|
6 ~8x1.5mm pieces. Squamous mucosa is 1.5-2% of thickness
|
Acceptable
|
|
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-1626 |
Adipose tissue
|
PAXgene |
1
|
2 ~ 9x7mm aliquots, areas of poor/under-fixation centrally
|
Acceptable
|
|
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 ~8x3mm pieces. Clean specimens
|
Acceptable
|
|
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 ~7x0.75mm pieces. Squamous mucosa is ~10% of thickness.
|
Acceptable
|
|
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2526 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~9x8mm aliquots, about 30% interspersed fat
|
Acceptable
|
|
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2826 |
Ovary
|
PAXgene |
1
|
2 ~12x7.5mm aliquots. Typical involuted/post-menopausal appearance; ~70% corpora albicantia
|
Acceptable
|
|
GTEX-PWO3
|
61-70
|
Female
|
GTEX-PWO3-2926 |
Cervix - ectocervix
|
PAXgene |
1
|
4 aliquots, ~6x5mm. No visible squamous mucosa
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-0226 |
Aorta
|
PAXgene |
1
|
6 pieces, ~ 7.5x1.5mm. Vasa vasorum well-demonstrated
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-0326 |
Adrenal glands
|
PAXgene |
1
|
2 aliquots, ~ 9x3.5mm, cortex only, well preserved. One aliquot ~30% adherent fat on one edge
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-0426 |
Coronary artery
|
PAXgene |
1
|
2 aliquots, one ~3x2mm, one 1.6x0.6mm. Larger aliquot with sub-total atherosclerotic occlusion.
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-0526 |
Heart
|
PAXgene |
1
|
2 ~7x6mm aliquots. Contraction band ischemic changes noted; focal fat in one aliquot
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-0626 |
Pancreas
|
PAXgene |
1
|
2 ~ 9x7mm pieces, remarkably well-preserved; good clean specimens. Minimal peri-pancreatic saponification
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-0726 |
Lung
|
PAXgene |
1
|
2 ~11x5mm aliquots. Diffuse mild-moderate acute pneumonitis/edema
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-0826 |
Liver
|
PAXgene |
1
|
2 ~9X8mm aliquots, extensive patterned microvesicular steatosis ? drug/toxic effect
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-0926 |
Thyroid gland
|
PAXgene |
1
|
1 13x9mm aliquot. Good clean specimen
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 ~7x3.5mm pieces. Single 0.6mm focus of sub mucosa mucous/serous glands noted in one piece
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-1126 |
Esophagus - mucosa
|
PAXgene |
1
|
6 ~6.5x3mm pieces. Squamous mucosa is 5-10% of thickness
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-1226 |
Stomach
|
PAXgene |
1
|
6 ~7x3.5mm pieces. Mucosa overall well-preserved, focally with superficial moderate autolysis. Chronic gastritis (patchy). Mucosa ranges from ~30-60% of thickness.
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-1426 |
Urinary bladder
|
PAXgene |
1
|
6 pieces, urothelium sparse and ~ 1% of thickness where visible (focal in 3of 6 aliquots, ~7x3.5mm)
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-1526 |
Uterus
|
PAXgene |
1
|
2 ~10x4mm aliquots. 99% myometrium; rare focal glands, probably lower uterine segment/upper endocervix
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-1626 |
Fallopian tube
|
PAXgene |
1
|
2 ~ 3mm d aliquots; good clean specimens
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-1826 |
Cervix - ectocervix
|
PAXgene |
1
|
4 ~11x4.5mm aliquots. Mainly squamous, focal glandular mucosa (transition zone), ~5-8% of thickness
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-1926 |
Cervix - endocervix
|
PAXgene |
1
|
4 ~10x3.4mm aliquots. Mixed endo & ectocervical mucosa (trace amounts)
|
Acceptable
|
|