GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces,~6x1.2mm; epithelium 0.3mm
|
Acceptable
|
|
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-2326 |
Prostate
|
PAXgene |
1
|
2 pieces,~11x7 mm; fibromuscular stroma, few glands (probably seminal vesicle) ; other piece resembles bladder wall; tissue tears
|
Unacceptable
|
|
GTEX-PVOW
|
21-40
|
Male
|
GTEX-PVOW-2626 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, ~6x3 mm; moderate tissue tears
|
Acceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-0326 |
Coronary artery
|
PAXgene |
1
|
2 aliquots, one ~3x2mm, clean, one ~1.6x0.5mm embedded in 3x2mm adipose tissue. See comment below
|
Acceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-0426 |
Aorta
|
PAXgene |
1
|
6 ~9x1mm pieces. Minimal atherosclerosis
|
Acceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-0626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces all muscularis, ~7x3mm
|
Acceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces with mucosa, ~4 x 7mm, mucosa ~25% of thickness
|
Acceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-0826 |
Pancreas
|
PAXgene |
1
|
2 ~8.5x7.5mm aliquots. Exceptionally well-preserved; Islets appear reduced in number
|
Acceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-1026 |
Urinary bladder
|
PAXgene |
1
|
6 ~ 8x3.5mm pieces. Urothelium completely sloughed; detrussor muscle and fat only
|
Acceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-1126 |
Prostate
|
PAXgene |
1
|
2 ~8x8mm aliquots. Glandular hyperplasia
|
Acceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-1226 |
Stomach
|
PAXgene |
1
|
5 ~6.5x3.5mm pieces; mucosa exceptionally well-preserved and ~15-20% of thickness
|
Acceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-1326 |
Thyroid gland
|
PAXgene |
1
|
Incorrect tissue, under-fixed adipose tissue only
|
Unacceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-1426 |
Testis
|
PAXgene |
1
|
2 ~10x8mm aliquots, one with area of central under-fixation
|
Acceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-1526 |
Skin, leg
|
PAXgene |
1
|
6 ~ 7x3.5 pieces; squamous mucosa is ~1.5—2% of thickness
|
Acceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-1626 |
Adipose tissue
|
PAXgene |
1
|
2 ~ 10x11 mm aliquots, areas of central under-fixation
|
Acceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-1726 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~ 10x7mm aliquots, ~15% interfascicular fat
|
Acceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-1826 |
Nerve - tibial
|
PAXgene |
1
|
2 ~4x3.5mm pieces, relatively clean
|
Acceptable
|
|
GTEX-PW2O
|
21-40
|
Male
|
GTEX-PW2O-1926 |
Artery - tibial
|
PAXgene |
1
|
2 ~ 2x1mm pieces, relatively clean
|
Acceptable
|
|
GTEX-PWCY
|
21-40
|
Female
|
GTEX-PWCY-0126 |
Spleen
|
PAXgene |
1
|
2, 9mm cubes, slightly congested
|
Acceptable
|
|
GTEX-PWCY
|
21-40
|
Female
|
GTEX-PWCY-0726 |
Esophagus - mucosa
|
PAXgene |
1
|
4 pieces, ~6x4 mm; some epithelium with excess glycogen
|
Acceptable
|
|
GTEX-PWCY
|
21-40
|
Female
|
GTEX-PWCY-0926 |
Stomach
|
PAXgene |
1
|
6 pieces, up to 10x4mm. mucosa varies in preservation from very good to moderate
|
Acceptable
|
|
GTEX-PWCY
|
21-40
|
Female
|
GTEX-PWCY-1126 |
Urinary bladder
|
PAXgene |
1
|
6 pieces, ~9x5 mm; much mucosa sloughed or thinned
|
Acceptable
|
|
GTEX-PWCY
|
21-40
|
Female
|
GTEX-PWCY-1526 |
Cervix - endocervix
|
PAXgene |
1
|
4 pieces, 2 are endocervix;2 are endometrium
|
Unacceptable
|
|
GTEX-PWCY
|
21-40
|
Female
|
GTEX-PWCY-1626 |
Cervix - ectocervix
|
PAXgene |
1
|
4 pieces, labeled endocervix; 2 are ectocervix, 2 are endocervix
|
Unacceptable
|
|
GTEX-PWCY
|
21-40
|
Female
|
GTEX-PWCY-1726 |
Vagina
|
PAXgene |
1
|
6 pieces, ~9x3mm, 5x6mm; all with squamous lining
|
Acceptable
|
|