GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, sqaumous mucosa up to ~0.4mm, ~40-50% of thickness
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-1826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-1926 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, glomeruli present; moderately advanced tubular autolysis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-2026 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, cortex, ~20$ stroma/fat, delineated
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-2126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, gynecomastoid stromal and dcutal (rep delineated) hyperplasia
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.4mm, glandular elements totally autolyzed
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-2326 |
Liver
|
PAXgene |
3
|
2 pieces, advanced autolysis. Established cirrhosis with diffuse macrovesicular steatosis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-2426 |
Testis
|
PAXgene |
2
|
2 pieces, tubular atrophy with markedly reduced spermatogenesis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-2526 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced autolysis in target mucosa; no target lymphid aggregates
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-2626 |
Prostate
|
PAXgene |
2
|
2 pieces, advanced glandular autolysis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-2726 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces, advanced autolysis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-2826 |
Stomach
|
PAXgene |
3
|
6 pieces, advanced autolysis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-2926 |
Pituitary gland
|
PAXgene |
1
|
1 piece, all adenohypophysis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-3026 |
Brain - cortex
|
PAXgene |
1
|
4 pieces, no abnormalities
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-3126 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, no abnormalities
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1OFPY
|
61-70
|
Male
|
GTEX-1OFPY-0126 |
Spleen
|
PAXgene |
1
|
2 pieces; slight congestion
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1OFPY
|
61-70
|
Male
|
GTEX-1OFPY-0226 |
Lung
|
PAXgene |
1
|
2 pieces; moderate vascular congestion and alveolar hemorrhage
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1OFPY
|
61-70
|
Male
|
GTEX-1OFPY-0326 |
Testis
|
PAXgene |
1
|
2 pieces; total sclerosis of tubules (no spermatogenesis) with Leydig cell hyperplasia. Changes consistent with Klinefelter syndrome.
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1OFPY
|
61-70
|
Male
|
GTEX-1OFPY-0426 |
Prostate
|
PAXgene |
1
|
2 pieces; 1 piece has over 50% muscle content
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1OFPY
|
61-70
|
Male
|
GTEX-1OFPY-0526 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed; <5% dermal fat; several hair follicles
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1OFPY
|
61-70
|
Male
|
GTEX-1OFPY-0626 |
Pancreas
|
PAXgene |
1
|
2 pieces; 10% & 30% internal fat; several partially sclerosed islets [arrowed]
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1OFPY
|
61-70
|
Male
|
GTEX-1OFPY-0726 |
Aorta
|
PAXgene |
1
|
6 pieces; no plaques; several have prominent adventitia 1mm thick
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1OFPY
|
61-70
|
Male
|
GTEX-1OFPY-0826 |
Omentum
|
PAXgene |
0
|
2 pieces; 5% fibrous content
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1OFPY
|
61-70
|
Male
|
GTEX-1OFPY-0926 |
Atrial appendage
|
PAXgene |
0
|
2 pieces; 1 piece surrounded by up to 1.4mm fibrous subpericardial layer; other has 60% fibrofatty content
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1OFPY
|
61-70
|
Male
|
GTEX-1OFPY-1026 |
Heart
|
PAXgene |
0
|
2 pieces; minimal fibrous & fatty content
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |