GTEX-P78B
|
41-50
|
Female
|
GTEX-P78B-1826 |
Stomach
|
PAXgene |
1
|
6 pieces ~8.5x2mm. Slight to focally moderate chronic gastritis
|
Acceptable
|
|
GTEX-P78B
|
41-50
|
Female
|
GTEX-P78B-1926 |
Ovary
|
PAXgene |
1
|
2 ~7 x 6 mm post-menopausal stroma
|
Acceptable
|
|
GTEX-P78B
|
41-50
|
Female
|
GTEX-P78B-2026 |
Fallopian tube
|
PAXgene |
1
|
1 4x2mm fallopian tube, good epithelium; one with muscular wall and vessels only
|
Acceptable
|
|
GTEX-P78B
|
41-50
|
Female
|
GTEX-P78B-2526 |
Uterus
|
PAXgene |
1
|
2 pieces: 10x2mm with abundant endometrium; 7.6x2 with little endometrium
|
Acceptable
|
|
GTEX-PLZ4
|
51-60
|
Female
|
GTEX-PLZ4-0126 |
Skin, leg
|
PAXgene |
1
|
6 ~10x1.5mm pieces. Squamous epithelium is ~1-1.5% of aliquot thickness
|
Acceptable
|
|
GTEX-PLZ4
|
51-60
|
Female
|
GTEX-PLZ4-0326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 ~10x7.5mm pieces, ~50% adipose. Rare ductal elements
|
Acceptable
|
|
GTEX-PLZ4
|
51-60
|
Female
|
GTEX-PLZ4-0826 |
Coronary artery
|
PAXgene |
1
|
2 ~3x2mm pieces, fat and myocardium; 1 minute vessel less than 10% of one aliquot
|
Unacceptable
|
|
GTEX-PLZ4
|
51-60
|
Female
|
GTEX-PLZ4-0926 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~7x7mm pieces. Interstitial fat is ~10% of both aliquots. Areas of under-fixation with holes/tears
|
Acceptable
|
|
GTEX-PLZ4
|
51-60
|
Female
|
GTEX-PLZ4-1426 |
Aorta
|
PAXgene |
1
|
6 ~ 9.5x1.5mm pieces
|
Acceptable
|
|
GTEX-PLZ4
|
51-60
|
Female
|
GTEX-PLZ4-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 ~6x2mm pieces. Squamous mucosa is ~10% of specimen thickness1
|
Acceptable
|
|
GTEX-PLZ4
|
51-60
|
Female
|
GTEX-PLZ4-2726 |
Vagina
|
PAXgene |
1
|
6 ~ 7.5x1.5mm pieces. Squamous mucosa, partially sloughed, on 3; less than 1% of specimen thickness
|
Acceptable
|
|
GTEX-PLZ4
|
51-60
|
Female
|
GTEX-PLZ4-2826 |
Ovary
|
PAXgene |
1
|
2 ~7x5mm pieces. Numerous corpora albicantia
|
Acceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-0326 |
Adrenal glands
|
PAXgene |
1
|
2 ~3x8mm pieces. All cortex, well-preserved
|
Acceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-0426 |
Aorta
|
PAXgene |
1
|
6 ~ 8.5 x 2mm pieces
|
Acceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-0526 |
Coronary artery
|
PAXgene |
1
|
2 ~1mm d pieces, less than 20% of aliquot; rest is fat
|
Acceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-0726 |
Lung
|
PAXgene |
1
|
2 ~6.5x5mm pieces. Well preserved; no inflammation; pronounced emphasymatous changes
|
Acceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-0826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 ~8x4mm pieces
|
Acceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
4 ~ 3x2.5mm pieces; mucosae is ~10 of specimen thickness
|
Acceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1026 |
Pancreas
|
PAXgene |
1
|
2 ~ 8x8mm pieces; only ~10% on one edge is pancreas, well-preserved. Rest is adipose tissue
|
Acceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1126 |
Colon, transverse
|
PAXgene |
1
|
6 ~5-6mm pieces. Areas of poor fixation. Mucosa is ~ 10% specimen thickness
|
Acceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1326 |
Urinary bladder
|
PAXgene |
1
|
6 ~8x4 mm pieces, 4 with urothelium, reasonably well-preserved, ~2.5% of specimen thickness
|
Acceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1426 |
Prostate
|
PAXgene |
1
|
Not prostate, seminal vesicle
|
Unacceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1526 |
Testis
|
PAXgene |
1
|
2 ~ 8 .56mm pieces, one with attached 7x4mm piece of fibrous tissue
|
Acceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1626 |
Nerve - tibial
|
PAXgene |
1
|
2 ~ 2.5x1mm nerve pieces; attached fat is ~ 50% of each aliquot
|
Acceptable
|
|
GTEX-PLZ5
|
41-50
|
Male
|
GTEX-PLZ5-1726 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~ 9x4.5mm pieces. Areas of underfixation, tears/holes. ~ 10% interspersed fat
|
Acceptable
|
|