GTEX-14LZ3
|
61-70
|
Female
|
GTEX-14LZ3-2926 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces; Purkinje cells with some evidence of hypoxic change
|
Acceptable
|
|
GTEX-14LZ3
|
61-70
|
Female
|
GTEX-14LZ3-3026 |
Brain - cortex
|
PAXgene |
2
|
5 pieces (fragmented); some increase in perinuclear halos (?hypoxic change vs autolysis)
|
Acceptable
|
|
GTEX-14PHW
|
61-70
|
Female
|
GTEX-14PHW-0826 |
Lung
|
PAXgene |
2
|
2 pieces, moderate congestion
|
Acceptable
|
|
GTEX-14PHW
|
61-70
|
Female
|
GTEX-14PHW-1326 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces, target muscularis
|
Acceptable
|
|
GTEX-14PHW
|
61-70
|
Female
|
GTEX-14PHW-1526 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, all target muscularis
|
Acceptable
|
|
GTEX-14PHW
|
61-70
|
Female
|
GTEX-14PHW-1726 |
Liver
|
PAXgene |
2
|
2 pieces, marked subacute central cardiac congestion
|
Acceptable
|
|
GTEX-14PHW
|
61-70
|
Female
|
GTEX-14PHW-2826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, target muscularis, unusually poorly preserved
|
Acceptable
|
|
GTEX-14PHW
|
61-70
|
Female
|
GTEX-14PHW-3226 |
Pituitary gland
|
PAXgene |
2
|
1 piece, all adenohypophysis. Unusually poorly preserved
|
Acceptable
|
|
GTEX-14PHY
|
61-70
|
Female
|
GTEX-14PHY-0126 |
Spleen
|
PAXgene |
2
|
2 pieces; capsule present
|
Acceptable
|
|
GTEX-14PHY
|
61-70
|
Female
|
GTEX-14PHY-0326 |
Atrial appendage
|
PAXgene |
2
|
2 pieces; 30% non-muscular stroma
|
Acceptable
|
|
GTEX-14PHY
|
61-70
|
Female
|
GTEX-14PHY-0726 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces; well trimmed
|
Acceptable
|
|
GTEX-14PHY
|
61-70
|
Female
|
GTEX-14PHY-0926 |
Stomach
|
PAXgene |
2
|
6 pieces; mucosa intact, but cells partially autolyzed; no muscularis
|
Acceptable
|
|
GTEX-14PHY
|
61-70
|
Female
|
GTEX-14PHY-1326 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; admixture with medulla in 2 pieces [outlined]; no chronic lesions except for medullary hyalin casts in one piece[outlined]
|
Acceptable
|
|
GTEX-14PHY
|
61-70
|
Female
|
GTEX-14PHY-1426 |
Aorta
|
PAXgene |
2
|
6 pieces; large calcified plaque in 3 of 6 pieces; flat plaques in other 3; untrimmed adventitia up to 1.7 mm thick
|
Acceptable
|
|
GTEX-14PHY
|
61-70
|
Female
|
GTEX-14PHY-1526 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; 10 & 30% external fat
|
Acceptable
|
|
GTEX-14PHY
|
61-70
|
Female
|
GTEX-14PHY-1826 |
Vagina
|
PAXgene |
2
|
6 pieces; atrophic, largely sloughed epithelium
|
Acceptable
|
|
GTEX-14PHY
|
61-70
|
Female
|
GTEX-14PHY-2126 |
Colon, sigmoid
|
PAXgene |
2
|
5 pieces; autolyzed mucosa (not target) and intact muscularis; LCM
|
Unacceptable
|
|
GTEX-14PII
|
61-70
|
Male
|
GTEX-14PII-0126 |
Testis
|
PAXgene |
2
|
2 pieces, reduced spermatogeneisis
|
Acceptable
|
|
GTEX-14PII
|
61-70
|
Male
|
GTEX-14PII-1326 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces, squamous mucosa 100-200 microns, 10-20% thickness; superficialy sloughing beginning. Submucosal mucus glands present, rep delineated
|
Acceptable
|
|
GTEX-14PII
|
61-70
|
Male
|
GTEX-14PII-1626 |
Adrenal glands
|
PAXgene |
2
|
2 pieces (fragemented), all cortex, ~10% adherent fat, rep delineated
|
Acceptable
|
|
GTEX-14PII
|
61-70
|
Male
|
GTEX-14PII-1726 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderate saponification; Islets dimly visible, a few rep delineated, but degrading. ~40% adherent/interstitial fat, delineated
|
Acceptable
|
|
GTEX-14PII
|
61-70
|
Male
|
GTEX-14PII-2326 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa ~0.25mm, ~10-15% thickness, many areas autolysis approached score 3 with sloughing of glandular elements
|
Acceptable
|
|
GTEX-14PJ2
|
51-60
|
Male
|
GTEX-14PJ2-0826 |
Lung
|
PAXgene |
2
|
2 pieces; congestion, emphysema-like changes, thickened alveolar walls and atelectasis; sloughed bronchial epithelium; one piece contains several noncaseating granulomata with foreign-body type giant cells (outlined)
|
Acceptable
|
|
GTEX-14PJ2
|
51-60
|
Male
|
GTEX-14PJ2-1626 |
Spleen
|
PAXgene |
2
|
2 pieces; marked congestion
|
Acceptable
|
|
GTEX-14PJ2
|
51-60
|
Male
|
GTEX-14PJ2-1726 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; ~50% external fat and autolyzed cortex grade 2/3
|
Acceptable
|
|