GTEX-OIZI
|
41-50
|
Male
|
GTEX-OIZI-0726 |
Thyroid gland
|
PAXgene |
1
|
8 x 6.7 mm. Focal scar <10%
|
Acceptable
|
|
GTEX-OIZI
|
41-50
|
Male
|
GTEX-OIZI-0926 |
Heart
|
PAXgene |
1
|
Patchy hypereosinophilia (ischemia). Central fracture artifact, possible underfixation. Refixation confirms initial poor fixation.
8.9x9.8mm
|
Acceptable
|
|
GTEX-OIZI
|
41-50
|
Male
|
GTEX-OIZI-1026 |
Lung
|
PAXgene |
1
|
Atelectasis
|
Acceptable
|
|
GTEX-OIZI
|
41-50
|
Male
|
GTEX-OIZI-1126 |
Aorta
|
PAXgene |
1
|
endothelium sloughed. 11 x 1.5mm
|
Acceptable
|
|
GTEX-OIZI
|
41-50
|
Male
|
GTEX-OIZI-1226 |
Spleen
|
PAXgene |
1
|
Moderate congestion
|
Acceptable
|
|
GTEX-OIZI
|
41-50
|
Male
|
GTEX-OIZI-1426 |
Esophagus - mucosa
|
PAXgene |
1
|
Squamous mucosa with prominent muscularis mucosae
|
Acceptable
|
|
GTEX-OIZI
|
41-50
|
Male
|
GTEX-OIZI-1526 |
Pancreas
|
PAXgene |
1
|
9 x 9 mm
|
Acceptable
|
|
GTEX-OIZI
|
41-50
|
Male
|
GTEX-OIZI-1826 |
Prostate
|
PAXgene |
1
|
Moderate atrophy. 10x8.6mm
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-0126 |
Skin, leg
|
PAXgene |
1
|
Epidermis is ~2-3% of specimen thickness. Patchy areas of soft tissue (deep) are poorly fixed.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-0226 |
Adipose tissue
|
PAXgene |
1
|
18x11mm. Central 80% is unfixed
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-0326 |
Heart
|
PAXgene |
1
|
9.4x7mm. Clean specimen. Diffuse contraction bands + nuclear hypertrophy c/w mild ischemic changes
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-0426 |
Aorta
|
PAXgene |
1
|
Specimens average 1.8mm thickness, clean sections.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-0526 |
Lung
|
PAXgene |
1
|
9 x 14mm. Diffuse mild edema.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-0626 |
Esophagus - mucosa
|
PAXgene |
1
|
Epithelial thickness 400-500 microns, 20-30% of section thickness. Focal soft tissue areas appear underfixed
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
4x9mm. Poor fixation, cracks and separation of sections.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-0826 |
Liver
|
PAXgene |
1
|
11.2x 8.3mm. About 10% macrovesicular steatosis.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1026 |
Pancreas
|
PAXgene |
1
|
11.2x8.3mm. Well preserved, less than 5% fat.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1526 |
Stomach
|
PAXgene |
1
|
Extremely well preserved. 1 of 4 pieces with little-no mucosa, which averages .8mm thickness in 3 pieces—two of which are 30-50%mucosa in thickness. Focal adipose areas underfixed.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1726 |
Nerve - tibial
|
PAXgene |
1
|
5 x 4.2 mm specimen, 30% intermingled adipose tissue. Center of one aliquot is poorly fixed (adipose).
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1826 |
Artery - tibial
|
PAXgene |
1
|
4.4 x 6.8 mm specimen.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1926 |
Urinary bladder
|
PAXgene |
1
|
Two of five sections poorly fixed/extreme separation. Mucosa sub-totally sloughed/degraded, about 31 microns thick where present
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-2026 |
Prostate
|
PAXgene |
1
|
13 x 9.7mm. Remarkably well preserved. Patchy glandular (papillary) hyperplasia, focal chronic prostatitis
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-2126 |
Testis
|
PAXgene |
1
|
12 x 8.8mm. Good spermatogenesis evident
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-2626 |
Thyroid gland
|
PAXgene |
1
|
Possible 0.4 x 0.6mm occult papillary ca, pending slide review. Patchy areas of peripheral adipose tissue are poorly fixed, tears and holes in section.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-3026 |
Coronary artery
|
PAXgene |
1
|
4.8 x 5.1mm specimen. ~20 circumferential atherosclerotic narrowing
|
Acceptable
|
|