GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-1126 |
Heart
|
PAXgene |
1
|
2 pieces; focal hemorrhage
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-1226 |
Liver
|
PAXgene |
1
|
2 pieces; congestion, mild steatosis
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-1326 |
Lung
|
PAXgene |
1
|
2 pieces; congestion, hemorrhage, patchy inflammation
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-1426 |
Omentum
|
PAXgene |
0
|
2 pieces; mature adipose tissue
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-1526 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; 3 of 6 include a significant portion of skeletal muscle admixed with smooth muscle indicating sampling too high
|
Unacceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis, small portion of attached fat/nerve
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-1826 |
Stomach
|
PAXgene |
2
|
6 pieces
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-1926 |
Spleen
|
PAXgene |
2
|
2 pieces; congested
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-2026 |
Pancreas
|
PAXgene |
2
|
2 pieces; moderate to severe autolysis, minimal internal fat
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-2126 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; small portion of residual attached fat (5-10%), cortex and medulla
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-2226 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections, some sclerotic
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-2326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis, some residual attached fat/vessels, portion of autolyzed mucosa
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-2426 |
Ileum
|
PAXgene |
3
|
6 pieces; significant component of targeted lymphoid tissue, but too autolyzed, also includes muscularis (not target)
|
Unacceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mostly autolyzed mucosa, some muscularis
|
Unacceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-2626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; 80-90% fat with some fibrous stroma/nerves
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-2726 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis is present
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-2826 |
Prostate
|
PAXgene |
2
|
2 pieces; fibromuscular stroma and glands with significant sloughing, nodular glandular hyperplasia
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-2926 |
Brain - cortex
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-3026 |
Pituitary gland
|
PAXgene |
1
|
1 piece; adenohypophysis and neurohypophysis, small portion of attached fat (~5%)
|
Acceptable
|
 |
GTEX-1EKGG
|
61-70
|
Male
|
GTEX-1EKGG-3126 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces; mild to moderate autolysis, residual attached mininges, Purkinje cells well visualized
|
Acceptable
|
 |
GTEX-1EMGI
|
61-70
|
Male
|
GTEX-1EMGI-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no dermal fat; squamous epithelium is ~50 microns
|
Acceptable
|
 |
GTEX-1EMGI
|
61-70
|
Male
|
GTEX-1EMGI-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~10% fascia/peripheral nerve elements, rep delineated
|
Acceptable
|
 |
GTEX-1EMGI
|
61-70
|
Male
|
GTEX-1EMGI-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~5 - 10% tendon (insertiion site), delineated
|
Acceptable
|
 |
GTEX-1EMGI
|
61-70
|
Male
|
GTEX-1EMGI-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, variable peripheral rim adherent fibrous tissue up to ~1mm.
|
Acceptable
|
 |