GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-1226 |
Esophagus - mucosa
|
PAXgene |
3
|
5 pieces; no epithelial layer, only muscularis mucosae & stroma
|
Unacceptable
|
|
GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-1426 |
Gastroesophageal junction
|
PAXgene |
3
|
5 pieces; autolyzed gastric mucosa is main component
|
Unacceptable
|
|
GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-1926 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces, mucosa extensively sloughed; erosive esophagitis
|
Acceptable
|
|
GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-2026 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.7mm, advanced autolysis
|
Acceptable
|
|
GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-2326 |
Ileum
|
PAXgene |
3
|
6 pieces, mucosa completely sloughed, <5% target lymphoid elements
|
Unacceptable
|
|
GTEX-1PWST
|
61-70
|
Male
|
GTEX-1PWST-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; target mucosa up to ~0.2mm; glandular elements sloughed, lamina propria remains
|
Acceptable
|
|
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1726 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa totally autolyzed; 2 without muscularis
|
Unacceptable
|
|
GTEX-1QEPI
|
61-70
|
Female
|
GTEX-1QEPI-2026 |
Stomach
|
PAXgene |
3
|
6 pieces
|
Unacceptable
|
|
GTEX-1QEPI
|
61-70
|
Female
|
GTEX-1QEPI-2326 |
Ileum
|
PAXgene |
3
|
6 pieces; mucosa totally autolyzed; no lymphoid collections; muscularis in all; (resembles colon)
|
Unacceptable
|
|
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-1726 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present in 3; advanced autolysis
|
Acceptable
|
|
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-1926 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, cortex, advanced autolysis; ~15-20% adherent fat, delineated
|
Acceptable
|
|
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2426 |
Ileum
|
PAXgene |
3
|
6 pieces, autolyzed mucosa, no target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.4mm, ~20-25% thickness. Glandular elements sloughed, lamina propria only
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2326 |
Stomach
|
PAXgene |
3
|
6 pieces; severely autolyzed gastric mucosa and preserved muscularis
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2726 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and <5% residual lymphoid aggregates
|
Unacceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2826 |
Colon, sigmoid
|
PAXgene |
3
|
4 pieces; autolyzed small focal rims of mucosa; moderate to severe autolysis of target muscularis
|
Acceptable
|
|
GTEX-1R46S
|
61-70
|
Female
|
GTEX-1R46S-1626 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present, tubules with advanced autolysis. Prominent glomerulo-sclerosis, interstitial fibrosis
|
Acceptable
|
|
GTEX-1R46S
|
61-70
|
Female
|
GTEX-1R46S-2326 |
Stomach
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.7mm, advanced autolysis
|
Acceptable
|
|
GTEX-1R46S
|
61-70
|
Female
|
GTEX-1R46S-2626 |
Ileum
|
PAXgene |
3
|
6 pieces, mucosa largely sloughed, <5% target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1R46S
|
61-70
|
Female
|
GTEX-1R46S-2826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.5mm, lamina propria only, glandular elements completely autolyzed/sloughed
|
Acceptable
|
|
GTEX-1RDX4
|
51-60
|
Female
|
GTEX-1RDX4-2526 |
Pancreas
|
PAXgene |
3
|
2 pieces; exocrine and endocrine elements affected by autolysis
|
Acceptable
|
|
GTEX-1RNSC
|
61-70
|
Male
|
GTEX-1RNSC-1526 |
Pancreas
|
PAXgene |
3
|
2 pieces, moderate-advance saponification; islets not visible
|
Acceptable
|
|
GTEX-1RNSC
|
61-70
|
Male
|
GTEX-1RNSC-2126 |
Ileum
|
PAXgene |
3
|
6 pieces, largely sloughed mucosa, bare trace residual target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1RNSC
|
61-70
|
Male
|
GTEX-1RNSC-2426 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces, target mucosa sloughing, <0.1mm
|
Acceptable
|
|
GTEX-1RNSC
|
61-70
|
Male
|
GTEX-1RNSC-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.2mm, advanced autolysis with vesitigal lamina propria only
|
Acceptable
|
|