GTEX-1NHNU
|
51-60
|
Male
|
GTEX-1NHNU-0526 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; 2 lymph nodes, no thyroid
|
Unacceptable
|
|
GTEX-1NHNU
|
51-60
|
Male
|
GTEX-1NHNU-0826 |
Coronary artery
|
PAXgene |
1
|
2 pieces; large occlusive atheromatous plaques; abundant untrimmed perivascular fat
|
Unacceptable
|
|
GTEX-1NHNU
|
51-60
|
Male
|
GTEX-1NHNU-2126 |
Stomach
|
PAXgene |
1
|
6 pieces; muscularis propria without mucosa
|
Unacceptable
|
|
GTEX-1NHNU
|
51-60
|
Male
|
GTEX-1NHNU-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; all have muscularis, but mucosa present on half; LCM
|
Unacceptable
|
|
GTEX-1NSGN
|
51-60
|
Male
|
GTEX-1NSGN-2626 |
Prostate
|
PAXgene |
1
|
2 pieces; mostly adipose tissue with fibrovascular component, nerves and gangions(arrows); focal fibromuscular tissue (outlined); no target tissue present
|
Unacceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-1426 |
Ileum
|
PAXgene |
2
|
6 pieces; 3 pieces mostly muscularis, not target; moderate to severe autolysis of mucosa; residual lymphoid aggregates (outlined) are ~ 10 % of tissue
|
Unacceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-1926 |
Uterus
|
PAXgene |
1
|
2 pieces; mostly parametrium with prominent thick walled vessels; no target endometrium or myometrium present
|
Unacceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-2126 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; mostly skeletal muscle fibers, nerves and fibrovascular tissue with focal small fragment of squamous epithelium; no target tissue observed
|
Unacceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-2326 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces; severely autolyzed mucosa and lack of good representation of target muscularis
|
Unacceptable
|
|
GTEX-1NV5F
|
61-70
|
Female
|
GTEX-1NV5F-0826 |
Liver
|
PAXgene |
2
|
2 pieces; nodular cirrhosis; centers of nodules are necrotic; 30% fibrous content; no normal tissue
|
Unacceptable
|
|
GTEX-1NV5F
|
61-70
|
Female
|
GTEX-1NV5F-1826 |
Vagina
|
PAXgene |
1
|
6 pieces; fibromuscular tissue without a mucosa; not vagina, possibly bladder
|
Unacceptable
|
|
GTEX-1NV5F
|
61-70
|
Female
|
GTEX-1NV5F-2326 |
Ileum
|
PAXgene |
2
|
6 pieces; insufficient lymphoid tissue
|
Unacceptable
|
|
GTEX-1NV5F
|
61-70
|
Female
|
GTEX-1NV5F-2926 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa severely autolyzed; muscularis moderately autolyzed
|
Unacceptable
|
|
GTEX-1NV8Z
|
61-70
|
Male
|
GTEX-1NV8Z-2626 |
Ileum
|
PAXgene |
3
|
6 pieces, ~50% fat, <5% target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1O97I
|
61-70
|
Male
|
GTEX-1O97I-2526 |
Ileum
|
PAXgene |
2
|
6 pieces; several foci of lymphoid tissue; large amount of muscularis propria. LCM
|
Unacceptable
|
|
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-0626 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~60% fascia/vascular elements, rep delineated;foreign pigmented material, unknown provenance, rep encircled (?tattoo?)
|
Unacceptable
|
|
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-2526 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced autolysis in target mucosa; no target lymphid aggregates
|
Unacceptable
|
|
GTEX-1OFPY
|
61-70
|
Male
|
GTEX-1OFPY-2026 |
Ileum
|
PAXgene |
1
|
6 pieces; well preserved ileal mucosa & submucosa, but only 2 pieces have lymphoid nodules & these are small; LCM
|
Unacceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-1026 |
Coronary artery
|
PAXgene |
1
|
2 pieces; fat and vein
|
Unacceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-1326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; some represent denuded mucosa, some are muscularis
|
Unacceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; some represent denuded mucosa, some muscularis
|
Unacceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-1526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; largely denuded mucosa and congested submucosa
|
Unacceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-2626 |
Ileum
|
PAXgene |
2
|
6 pieces; full thickness sections (muscularis is not target), only scattered lymphoid follicles
|
Unacceptable
|
|
GTEX-1OKEX
|
61-70
|
Male
|
GTEX-1OKEX-1026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, mainly mucosa/fat, <20% target muscularis
|
Unacceptable
|
|
GTEX-1OKEX
|
61-70
|
Male
|
GTEX-1OKEX-2126 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, ~20% glandular elements (rep. delineated) rest is stroma
|
Unacceptable
|
|