No squamous mucosa present; Recut: rotation of block shows no mucosa
Acceptable
GTEX-NL3G
61-70
Female
GTEX-NL3G-2326
Cervix - endocervix
PAXgene
1
No endocervical mucosa present or totally autolyzed; Recut: rotation of block shows no mucosa, however focal lower uterine segment stroma is now present.
Acceptable
GTEX-NL3G
61-70
Female
GTEX-NL3G-2526
Vagina
PAXgene
1
Squamous mucosa ~2-3% of thickness
Acceptable
GTEX-NL3G
61-70
Female
GTEX-NL3G-2826
Pituitary gland
PAXgene
1
Moderately autolyzed
Acceptable
GTEX-NL3G
61-70
Female
GTEX-NL3G-2926
Brain - cortex
PAXgene
1
adequate for analysis
Acceptable
GTEX-NL3G
61-70
Female
GTEX-NL3G-3026
Brain - cerebellum
PAXgene
1
Granular layer appears slightly autolyzed; outer layer many cracks (artifacts); last tissue fixed.
Acceptable
GTEX-NL3H
51-60
Male
GTEX-NL3H-1626
Spleen
PAXgene
1
Severe acute passive congestion
Acceptable
GTEX-NL3H
51-60
Male
GTEX-NL3H-2326
Prostate
PAXgene
1
Severe glandular autolysis, but cells still identifiable
Acceptable
GTEX-NL3H
51-60
Male
GTEX-NL3H-2626
Brain - cerebellum
PAXgene
1
2 pieces 4.2 mm
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-0126
Skin, leg
PAXgene
1
Epidermis is about 2% of total thickness of specimen; mainly dermis + subcutaneous fat
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-0226
Adipose tissue
PAXgene
1
A number of peripheral nerves @ periphery. Large central ‘hole’
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-0326
Lung
PAXgene
1
Mild congestion/edema
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-0426
Esophagus - mucosa
PAXgene
1
Epithelial thickness is approx 15% of total thickness of specimen
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-0526
Esophagus - muscularis
PAXgene
1
Reasonably good preservation
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-0626
Heart
PAXgene
1
Minimal interstitial fibrosis
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-1326
Brain - cortex
PAXgene
1
Well-preserved
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-1426
Brain - cerebellum
PAXgene
1
Well-preserved
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-1526
Muscle, skeletal
PAXgene
1
~25% adipose tissue centrally
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-1626
Nerve - tibial
PAXgene
1
Approximately 40% of specimen is intermingled adipose tissue
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-1726
Artery - tibial
PAXgene
1
Good, clean specimen
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-1826
Aorta
PAXgene
1
Minimal atherosis
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-1926
Liver
PAXgene
1
Mild congestion
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-2426
Thyroid gland
PAXgene
1
Remarkably well-preserved for endocrine organ
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-2526
Pituitary gland
PAXgene
1
Well-preserved
Acceptable
GTEX-NL4W
51-60
Male
GTEX-NL4W-2626
Coronary artery
PAXgene
1
~40% luminal occlusion by atherosclerotic debris; good clean specimen, minimal peripheral fat/muscle