GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1426 |
Pancreas
|
PAXgene |
3
|
2 pieces; severely autolyzed pancreas
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1526 |
Ileum
|
PAXgene |
3
|
2 pieces; moderately to severely autolyzed, but with significant lymphoid component in 5 of 6 pieces, one piece is muscularis only
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1626 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections, mucosa is severely autolyzed, but muscularis is better preserved
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; target muscularis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1826 |
Liver
|
PAXgene |
1
|
2 pieces; include capsule (target is 1cm below capsule), central congestion
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1926 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; moderately autolyzed, include significant portion of medulla
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-2026 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; moderately autolyzed, 75% and 40% fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-2126 |
Esophagus - mucosa
|
PAXgene |
2
|
5 pieces; squamous mucosa is largely sloughed
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-2226 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces; target muscularis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-2326 |
Stomach
|
PAXgene |
2
|
6 pieces; predominantly muscularis, only 1 piece includes a small strip of mucosa
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-2426 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; target muscularis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-2526 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; 1 piece is portion of lip, 2nd is salivary gland elements with attachment of fat (~20%)
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-2626 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; mostly well trimmed, but few include ~10% fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-2726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; 1 is predominantly fat with smaller component of stroma/ducts, 2nd is mostly dense stroma with scattered ducts and ~20% fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-2826 |
Testis
|
PAXgene |
2
|
2 pieces; spermatogenesis is present
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-2926 |
Prostate
|
PAXgene |
2
|
2 pieces; fibromuscular stroma with glands with sloughed lining, numerous corpora amylacea
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-3026 |
Brain - cortex
|
PAXgene |
1
|
4 pieces; small focus of pigmented macrophages with surrounding edema, consistent with old infarct
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-3126 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces; small portion of residual attached meninges
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-3226 |
Pituitary gland
|
PAXgene |
2
|
1 piece; mild to moderate autolysis, predominantly adenohypophysis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVAO
|
61-70
|
Male
|
GTEX-1LVAO-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces; 5% dermal fat; well trimmed
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVAO
|
61-70
|
Male
|
GTEX-1LVAO-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 5 & 10% fibrous content
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVAO
|
61-70
|
Male
|
GTEX-1LVAO-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 20% internal and external fat content
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVAO
|
61-70
|
Male
|
GTEX-1LVAO-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; mild fibrous intimal thickening; well trimmed
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVAO
|
61-70
|
Male
|
GTEX-1LVAO-0526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; severe atrophy with 20% & 50% internal fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVAO
|
61-70
|
Male
|
GTEX-1LVAO-0626 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 10% fat content
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |