GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-1726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa totally autolyzed, but muscularis intact and could be used to compare with sigmoid [LCM]
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-1826 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa with minimal lymphoid tissue; specimens have full thickness of ileal wall
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-1926 |
Aorta
|
PAXgene |
1
|
6 pieces; 3 have thin fibrous intimal plaques
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-2026 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; 3 pieces have autolyzed mucosal remnants [labeled]
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-2126 |
Testis
|
PAXgene |
1
|
2 pieces; slight reduction in mature spermatogenesis
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-2226 |
Stomach
|
PAXgene |
2
|
6 pieces; no muscularis propria present
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-2326 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; <1mm salivary gland; remainder is lip and connective tissue
|
Unacceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-2426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibrofatty tissue without mammary ducts
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-2526 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed; <10% dermal fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-2626 |
Pituitary gland
|
PAXgene |
1
|
1 piece; mostly anterior lobe; posterior labeled
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-2726 |
Brain - cortex
|
PAXgene |
1
|
2 fragmented pieces
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-2826 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed with minimal internal/periadnexal fat, epidermis measures about 34 microns, few collections of lymphocytes
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature fat, <10% fibrous tissue and nerve
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; skeletal muscle with minimal internal fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces; include 20 and 40% attached and internal fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; mild atherosclerosis with focal calcification
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0626 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; moderately to severely autolyzed, ~15% of 1 piece is fat/vessels
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0726 |
Aorta
|
PAXgene |
1
|
6 pieces; mild plaque, some residual attached fat/adventitia
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0826 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; up to 20% is fibrous, trivial internal fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-0926 |
Heart
|
PAXgene |
1
|
2 pieces; patchy areas of scar, some fragmentation of fibers, small component of perivascular fat
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1026 |
Coronary artery
|
PAXgene |
1
|
2 pieces; calcific atherosclerosis with luminal narrowing of 50-75%, partial rim of attached fat up to 10-30%
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1126 |
Lung
|
PAXgene |
2
|
2 pieces; marked congestion
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1226 |
Omentum
|
PAXgene |
1
|
2 pieces; mature fat, few larger vessels
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1326 |
Spleen
|
PAXgene |
2
|
2 pieces; congested
|
Acceptable
|
![View Image View Image](/brd/images/magGlass16x16.png) |