GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1326 |
Ileum
|
PAXgene |
1
|
6 pieces, target lymphoid aggregates are ~20% of tissue, rep delineated; good specimen
|
Acceptable
|
|
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa up to ~0.4mm, ~10% thickness
|
Acceptable
|
|
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1626 |
Prostate
|
PAXgene |
1
|
2 pieces, glandular hyerplasia
|
Acceptable
|
|
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1726 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis present, normal levels
|
Acceptable
|
|
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1926 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces, ~80% gland/duct parenchyma; rest is gland stroma
|
Acceptable
|
|
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-2026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, gynecomastoid stromal hyperplasia; focal peripheral nerve/vascular elements, delineated
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-0126 |
Skin, leg
|
PAXgene |
1
|
4 pieces; well trimmed; 10% dermal fat
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-0326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; 5% fat content
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 30% fat content
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; no lesions; external fat on 1 piece
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-0626 |
Aorta
|
PAXgene |
1
|
6 pieces; no plaques; well formed mural fibers; well trimmed of external fat
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-0826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; densely fibrotic stroma with few mammary ducts
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-0926 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces; well dissected glands
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1026 |
Lung
|
PAXgene |
1
|
2 pieces; no exudates or fibrosis; bronchus in larger piece
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1126 |
Liver
|
PAXgene |
1
|
2 pieces; no infiltrates, fibrosis, congestion or fat
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1226 |
Omentum
|
PAXgene |
1
|
2 pieces; smaller piece has 30% fibrous content
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1526 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; well trimmed except for a 4mm fat nodule at end of 1 piece
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
5 pieces; partly disrupted squamous epithelium
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1826 |
Esophagus - muscularis
|
PAXgene |
1
|
5 pieces; well dissected except 1 piece has 20% fibrous stroma
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-1926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; 4 pieces have 10 to 30% fat content
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2026 |
Stomach
|
PAXgene |
1
|
4 pieces; no mucosa, only muscularis and fat
|
Unacceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2126 |
Ileum
|
PAXgene |
1
|
5 pieces; 4 pieces have mucosal lymphoid tissue, but muscularis present on all; LCM
|
Unacceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2326 |
Ovary
|
PAXgene |
1
|
2 pieces; ovum present
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; extraneous fibrous and fatty tissue in several pieces
|
Acceptable
|
|