GTEX-1MCQQ
|
51-60
|
Male
|
GTEX-1MCQQ-1526 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; all pieces contain large amounts of medulla as well as cortex
|
Unacceptable
|
|
GTEX-1MCQQ
|
51-60
|
Male
|
GTEX-1MCQQ-1726 |
Pancreas
|
PAXgene |
3
|
2 pieces
|
Unacceptable
|
|
GTEX-1MCQQ
|
51-60
|
Male
|
GTEX-1MCQQ-2626 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces; lacks features of cerebellum
|
Unacceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces; predominantly fat with lesser portion of vein, smaller artery
|
Unacceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1026 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; mucosa, not muscularis
|
Unacceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1526 |
Ileum
|
PAXgene |
1
|
6 pieces; 3 full thickness colon, 3 muscularis only
|
Unacceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 3 are muscularis only, 3 are full thickness (mucosa not target)
|
Unacceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-1226 |
Pancreas
|
PAXgene |
3
|
2 pieces; severe autolysis involving internal fat, parenchyma and Langerhans islets
|
Unacceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-1826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; target mucosa not present; well preserved muscularis
|
Unacceptable
|
|
GTEX-1MJK3
|
21-40
|
Male
|
GTEX-1MJK3-0826 |
Ileum
|
PAXgene |
1
|
6 pieces; good lymphoid nodules on several pieces; all with muscularis; LCM
|
Unacceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-1326 |
Ileum
|
PAXgene |
1
|
6 pieces, no target lymphoid aggregates present
|
Unacceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-1926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, target muscularis present; gastric mucosa present, wrong target source
|
Unacceptable
|
|
GTEX-1N2DW
|
51-60
|
Male
|
GTEX-1N2DW-2526 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and too few lymphoid aggregates (outlined) to warrant analysis(<5%)
|
Unacceptable
|
|
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-0726 |
Lung
|
PAXgene |
2
|
2 pieces; alveolar hemorrhage, macrophages and fibrosis
|
Unacceptable
|
|
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-0826 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; skeletal muscle not thyroid
|
Unacceptable
|
|
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-1626 |
Stomach
|
PAXgene |
2
|
4 pieces; no mucosa, muscularis only
|
Unacceptable
|
|
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-1826 |
Ileum
|
PAXgene |
2
|
5 pieces; mucosa autolyzed; dispersed lymphoid tissue; muscularis present in 4 pieces
|
Unacceptable
|
|
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-2026 |
Minor salivary glands
|
PAXgene |
2
|
2 pieces; larger contains nerves and fat with 5% salivary gland tissue; smaller is skeletal muscle and fat with 1 duct
|
Unacceptable
|
|
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-2526 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces; autolyzed glandular mucosa & submucosa; no squamous epithelium
|
Unacceptable
|
|
GTEX-1N5O9
|
61-70
|
Male
|
GTEX-1N5O9-2626 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and no residual target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1N7R6
|
21-40
|
Female
|
GTEX-1N7R6-0526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; profound atrophy with subsequent excess of fat/nerve tissue
|
Unacceptable
|
|
GTEX-1N7R6
|
21-40
|
Female
|
GTEX-1N7R6-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; large numbers of metaplastic/ectopic sebaceous glands, several pieces include muscularis propria
|
Unacceptable
|
|
GTEX-1N7R6
|
21-40
|
Female
|
GTEX-1N7R6-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; 3 pieces with mildly to moderately autolyzed gastric and esophageal mucosa and lymphoid aggregates (arrows), not target tissue; target muscularis well preserved
|
Unacceptable
|
|
GTEX-1N7R6
|
21-40
|
Female
|
GTEX-1N7R6-1726 |
Vagina
|
PAXgene |
1
|
6 pieces; bladder, not vagina
|
Unacceptable
|
|
GTEX-1N7R6
|
21-40
|
Female
|
GTEX-1N7R6-2126 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa; ~ 15% tissue is residual target lymphoid aggregates, all include muscularis (not target)
|
Unacceptable
|
|