GTEX-1R9K5
|
51-60
|
Male
|
GTEX-1R9K5-1426 |
Aorta
|
PAXgene |
1
|
6 pieces. atherosis up to ~0.2mm
|
Acceptable
|
|
GTEX-1R9K5
|
51-60
|
Male
|
GTEX-1R9K5-1526 |
Esophagus - mucosa
|
PAXgene |
1
|
4 pieces, squamous mucosa up to ~0.4mm, ~30% thickness
|
Acceptable
|
|
GTEX-1R9K5
|
51-60
|
Male
|
GTEX-1R9K5-1626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1R9K5
|
51-60
|
Male
|
GTEX-1R9K5-1726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1R9K5
|
51-60
|
Male
|
GTEX-1R9K5-1826 |
Omentum
|
PAXgene |
1
|
2 pieces, ~5% interstitial vascular elements (rep delineated)/fascia
|
Acceptable
|
|
GTEX-1R9K5
|
51-60
|
Male
|
GTEX-1R9K5-2126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, mucosa up to ~0.5mm-variably fixed, mainly score 1, focal areas score 2 with gland sloughing
|
Acceptable
|
|
GTEX-1R9K5
|
51-60
|
Male
|
GTEX-1R9K5-2226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1R9K5
|
51-60
|
Male
|
GTEX-1R9K5-2326 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis is present
|
Acceptable
|
|
GTEX-1R9K5
|
51-60
|
Male
|
GTEX-1R9K5-2426 |
Prostate
|
PAXgene |
1
|
2 pieces, glandular (encircled) & stromal hyperplasia; stroma predominates
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, nodular goitre; regressive changes
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0326 |
Aorta
|
PAXgene |
1
|
6 pieces, adherent serosa/fat up to ~1mm
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0426 |
Lung
|
PAXgene |
1
|
2 pieces, trace congestion
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0526 |
Liver
|
PAXgene |
1
|
2 pieces, macrovesicular steatosis, moderate, ~30-40% of parenchyma
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0626 |
Pancreas
|
PAXgene |
1
|
2 pieces, islets fairly well preserved, rep encircled. ~30% fat, rep delineated
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0726 |
Omentum
|
PAXgene |
1
|
2 pieces, trace fascia
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0826 |
Stomach
|
PAXgene |
1
|
6 pieces, target mucosa up to ~1mm, ~25-30% thickness. Luminal surface more autolyzed
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.4mm, ~10-20% thickness. Few submucosal mucus glands present, rep encircled
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1126 |
Gastroesophageal junction
|
PAXgene |
1
|
5 pieces, confirmed target muscularis; ~10% "contaminant" mucosa, rep delineated
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1226 |
Prostate
|
PAXgene |
1
|
2 pieces. Not target prostate; seminal vesicle
|
Unacceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1326 |
Testis
|
PAXgene |
1
|
2 pieces. Not testis. Stromal tissue of unknown provenance.
|
Unacceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis. ~15-20% 'contaminant' mucosa present, rep delineated
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa up to ~0.4mm, 15-20% thickness
|
Acceptable
|
|
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1626 |
Ileum
|
PAXgene |
1
|
6 pieces, target lymphoid aggregates up to ~25% of tissue, rep delineated
|
Acceptable
|
|