GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; well dissected muscularis
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-1426 |
Omentum
|
PAXgene |
1
|
2 pieces; minimal fibrous content
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-1526 |
Liver
|
PAXgene |
2
|
2 pieces; slight degree of congestion
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-1626 |
Spleen
|
PAXgene |
2
|
2 pieces; moderate congestion
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-1726 |
Pancreas
|
PAXgene |
2
|
2 pieces; 20% internal fat content
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-1826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; minimal fat content
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-1926 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces; tubules and ducts severely autolyzed; glomeruli somewhat better preserved; no sign of chronic or acute lesions
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2026 |
Prostate
|
PAXgene |
2
|
2 pieces; variable acinar autolysis, moderate to severe
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2126 |
Testis
|
PAXgene |
2
|
2 pieces; active spermatogenesis, but poorly preserved
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2226 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed; <5% dermal fat
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibrofatty tissue without mammary ducts
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa autolyzed or sloughed; muscle intact; LCM+
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2526 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; well dissected glands with 10% internal fat
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; muscularis with up to 20% submucosal stroma
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2726 |
Ileum
|
PAXgene |
1
|
6 pieces; several foci of lymphoid tissue, but mostly muscularis propria; LCM
|
Unacceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2826 |
Stomach
|
PAXgene |
3
|
6 pieces; autolyzed mucosa without muscularis
|
Unacceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2926 |
Brain - cortex
|
PAXgene |
2
|
4 pieces; 1mm external focus of debris, possible bone and tissue [labeled]
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-3026 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-3126 |
Pituitary gland
|
PAXgene |
1
|
1 piece; all adenohypophysis; no neural elements in this cut
|
Acceptable
|
 |
GTEX-1KD5A
|
51-60
|
Male
|
GTEX-1KD5A-0126 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; hair-bearing skin, includes up to ~10% fat
|
Acceptable
|
 |
GTEX-1KD5A
|
51-60
|
Male
|
GTEX-1KD5A-0226 |
Skin, leg
|
PAXgene |
1
|
6 pieces; essentially well trimmed, epidermis measures 39 microns
|
Acceptable
|
 |
GTEX-1KD5A
|
51-60
|
Male
|
GTEX-1KD5A-0326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 20 and 50% fat, remainder is loose connective tissue, vessels, nerve
|
Acceptable
|
 |
GTEX-1KD5A
|
51-60
|
Male
|
GTEX-1KD5A-0426 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; nodularity with scattered groups of lymphocytes
|
Acceptable
|
 |
GTEX-1KD5A
|
51-60
|
Male
|
GTEX-1KD5A-0526 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; nerve with trivial attachment of fat
|
Acceptable
|
 |
GTEX-1KD5A
|
51-60
|
Male
|
GTEX-1KD5A-0626 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; mild plaque
|
Acceptable
|
 |